Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01907 ATGAGACAGCACAAGTTTTCATCTCTCAACAGCAACAGGCGACCGACGATTCTGTATCTAGTCTCTGCTGTTGCATTTTTCTCGTTTCTAGTTTTTGCTCTCCAATCCTCTTTCTTTGCAGGATCTCTGACGCTAGATCGCAATAGAGAAACAATTCGTACATTATCTGATTTTCAGTACAGTGTTCAGCAATGCGTGGCAAACAGGGGGCTTGGGCTTACTGCACAGATTATTGACCACTGCAAATTGATCCTTAAATTCCCCGAAGGCACCAACAGCACTTGGtATAATGAAcaattcaaaatctttgaGCCTTTGGAGTATCAGTATGATGTATGTGAGGCTATTCTATTGTGGGAACAgTATCGTAACATGACTACAGTGTTGACCCGAGAATATCTAGATGCTCGTCCTGATGGGTGGTTAGACTATGCAGCAAAAAGGATAGCACAATTGGGGGCAAAAAAGTGCTATAATAAGACTCTTTGTGAAGAACATCTCAATATCTTATTACCAGGAAAACCTCCCTTTCATCCACGACAGTTCCAAACATGTGCTGTTGTTGGAAATTCTGGAGATCTACTGAAAACCGAATTTGGGAAAGAAATTGATGGTCATGATGCTGTTTTCCGAGACAATGAGGCCCCAGTAAATGAGaaatatgCCAAGTATGTGGGTCTTAAGAGGGATTTTCGTCTAGTTGTAAGGGGTGCTGCTGGTAACATGGTCACTATTCTAAATGGATCTGaTGATGAGGTGCTCATTATCAAAAGTATGACACATAGGGACTTCAATGCAATGATAAAGACTATTCCAAATCCTGTCTATCTCTTCCAAGGTATCGTACTACGTCGAGGCGCCAAAGGAACTGGAATGAAATCTATAGAATTAGCACTCTCTATGTGTGACATTGTTGACATATATGGTTTCACTGTTGATCCAGGATACACTGAATGGACAAGATACTTCTCTACTCCTAGGAAGGGACACAATCCACTTCAAGGAAGGGCATACTACCAGCTTCTAGAATGCCTTGGgGTAATCAGGATTCATTCTCCCATGAGATCTAAGAGGAGCCAAGACTGGTCCGATGTGCCAAGTCGAGAAATGATAAGCCAAGCTCATGCAGCAGCTTTACGTTTACAAAGGAGTCAAGCCGGTCAGATCAGTGATATGGGGCAGTTTGGCACTTGTAAGGTATGGGGCAACGTGGATCCTGACAAAAGTGGACCTGTCTCAGGATCTCCAGACATGAGCGATGTCAGGAAGTATTCCAACTATAGCAAATGGGAAATGATGCCCTTTGAGAGTTTGAGAAAAGAAGCACAGGATCACTATATCCAAATGCAAGGGGTCTCTCTATATAAAATGGATGGAAATAAGTTGGAAGATCTAGTGTGCGTGAGACATTCCTTAAAATCCGAGACAGCTTTAACCTTTGCCCCAACCCTTGTTCCTTTGGCACCTTCCAAGAACATCACCCAACCCACCAGCTTTCCCTCAAAGTTAACTGGCTCACCGGCTTCCACTCGTTTATCTCCAATCAAAGCTTCCAGCGTGAACTACAACTCTCCGATATCAGTTTTTCCTGCAGAAGCATGTGAAACCATTGGAGGGGAAGCCTGTTTGGCAGACATGTACCCTGAAGTGAGGTTAGAGCCAGAGCCCAAAAATGCCCCACCACGAATTGCTACAGAGAACGTTGAGAGAGAGTATCTGGAATACAATGAAGCAAAGACGGTTTTCCGAGCAGAGGCTTGTGATGACCTTGGAGGAATGTTCTGTGAGCACGATTATCAGAAGAGTGTTTATTa 1814 0.4311 MRQHKFSSLNSNRRPTILYLVSAVAFFSFLVFALQSSFFAGSLTLDRNRETIRTLSDFQYSVQQCVANRGLGLTAQIIDHCKLILKFPEGTNSTWYNEQFKIFEPLEYQYDVCEAILLWEQYRNMTTVLTREYLDARPDGWLDYAAKRIAQLGAKKCYNKTLCEEHLNILLPGKPPFHPRQFQTCAVVGNSGDLLKTEFGKEIDGHDAVFRDNEAPVNEKYAKYVGLKRDFRLVVRGAAGNMVTILNGSDDEVLIIKSMTHRDFNAMIKTIPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEWTRYFSTPRKGHNPLQGRAYYQLLECLGVIRIHSPMRSKRSQDWSDVPSREMISQAHAAALRLQRSQAGQISDMGQFGTCKVWGNVDPDKSGPVSGSPDMSDVRKYSNYSKWEMMPFESLRKEAQDHYIQMQGVSLYKMDGNKLEDLVCVRHSLKSETALTFAPTLVPLAPSKNITQPTSFPSKLTGSPASTRLSPIKASSVNYNSPISVFPAEACETIGGEACLADMYPEVRLEPEPKNAPPRIATENVEREYLEYNEAKTVFRAEACDDLGGMFCEHDYQKSVY 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01907 604 Pfam Light regulated protein Lir1 476 596 IPR009856 GO:0009507
Bva04g01907 604 Pfam Glycosyltransferase family 29 (sialyltransferase) 161 265 IPR001675 GO:0006486|GO:0008373
Bva04g01907 604 Gene3D Glycosyl transferase family 29 143 353 IPR038578 -
Bva04g01907 604 PANTHER SIALYLTRANSFERASE-LIKE PROTEIN 1 10 475 IPR044782 GO:0008373|GO:0009846|GO:0009860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01907 Bva-Chr4 19417155 19422636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01907 67 347 Glycosyltransferase AT1G08660 89.680 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01907 - - qsu:111996883 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01907 04 19417155 19422636 Bva04g01907 04 19417155 19422636 ECH