Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01903 ATGAGCAGCTGGAAAAGTCTTCTTCTGCGAATCGGCGACAAGTGCCCCGAATATGGAACCAGCTCCGACTTCAAAGAGCACATTgaAACGTGTTTTGGTGCTCTAAGACGTGAGCTGGAACACTCTGGAGCTGATATTTTGCAgTTCCTTCTCCAATGTGCTGAGCAATTGCCTCACAAGATTTCTTTATATGGAACTGTGATTGGTTTAATTAACTTAGAAAATGAGGAATTCGTGAAGAAACTAGTGGAGAAAACCTACACGAATTTTCAGGATGCCTTGGATTCTGGTAACTTCAACAGTATTCGTATTTTAATGCGGTTAATGACTGTTATGatgTGCAGTAAGGTTCTTCAGCCAGGTTCTTTGGTGGTTGTCTTTGAAACATTATTATCATCAGCTGCCACAACAGTAGATGAGGAAAAAGGAAATCCCTCCTGGCAACCGTGTGCTGACTTTTACATAACTTGCATTTTATCCTGTCTCCCATGGGGTGGAGCTGAACTTGTTGAGCAAGCTCCTGAAGAGATTGAGAGGGTCATGGTGGGAATAGAAGCTTACTTGAGCATCAGAAGGCCTACTTCTGATACTGGTTTATCCTTTTTTGAGAAAGATGATGAAACTGAGAGAAGTCCTGGTGATAAGGATTTCTTGGAGGATTTATGGGATAGAGTACAAGTTTTATCAAGCAATGGATGGAAAGTTGATAGTGTTCCCAGACCACATCTTTCATTTGAAGCTCAGTTGGTTGCTGGCAAATCACATGAATTTGGGCCAATAAACTGTCCCAACTCACCTAATCCTCCTTCTGAACCTTCTGGCATAGCTTATGATAGACAGAAGCATGAGGCAGAATTAAAATATCCTCAAAGGATACGTCGGCTTAACATATTTCCTCCAAGTAAAATTCAGGATCTACAACCTATAGATCGCTTTGTTGTGGAAGAGTATCTCCTTGATGTGCTTCTGTTCTTCAATGGCTGCCGAAAGGAATGCGCTTCTTTCATGGTAGGCTTGCCAGTGCCGTTTAGATATGAATACCTCATGGCTGAGACAATTTTCTCACAGCTGTTGATGCTGCCCCATCCCCCGTTTAAGCCAATATATTACACACTTGTTATAATTGACCTATGTAAGGCTCTTCCTGGAGCTTTTCCTGCAGTTGTGGCTGGAGCAGTTCGTACCCTCTTTGATAAAATTGCTGATTTGGATATGGAGTGTCGGACACGTCTCATACTTTGGTTCTCACATCATTTATCAAACTTCCAGTTTATCTGGCCTTGGGAAGAGTGGGCTTATGTCTTAGACCTCCCAAAGTGGGCCCCACAACGTGTGTTTGTTCAGGAAGTTTTGGAGAGGGAAGTTCGTTTGTCCTATTGGGACAAAGTCAAGCAGagcATTGAGAATGCACCTGGTTTAGAGGAATTGCTTCCTCCAAAGGGTGGGCCAAACTTCAGTTTTGGGGCTGAAGATGGtgaagaaaaaacagaacATGTGCTTTCTGGAGAACTCAATAACATGGTTAAAGGAAGGGCACCTGTCCGAGAAATAATATCTTGGATTGATGAAAATGTATTGCCAAATAATGGTCTAGAAGTTACTCTCGGAGTGGTCGTACAAACTCTTCTCAATATTGGATCTAAGAGTTTCACTCACTTGATAATTGTCTTGGAAAGATATGGACAAGTCTTTGCAAAAGTATGCCCTGACCAAGATAAGCAAGTTATGCTGATAGCTGAAGTGAGCTCTTTCTGGAAGAGTAACACCCAAATGACAGCAATAGCAATTGATAGGATGATGGGTTACCGACTTGTGTCAAATTTGGCCATTGTGAGATGGGTGTTCTCTACAGAGAATATTGACCAATTTCATATATCTGATCGTCCTTGGGAGATTCTTAGAAATGCAATAAGCAAGACATACAATCGTATTTCTGATCTAAGGAAGGAGATATTATCTCTTAAAAGGAATATTTCATCTGCTGAAGAAGCTGCTAAGGAGTCAAAGGCAGAGTTAGATGCTGCAGAGTCAAAACTTTCACTAGTGGATGGTGAACCAGTTGTTGGTGAAAATCCTGTTAGGTTGAATCGATTGAGATCACATGctgaaaaagcaaaagaggaaGTTGTATCTCTTCGAGAATCTTTAGAAGCCAAGGAAGCTCTCCTTGCCCGGGCAATTGATGAAAATGAGGAATTATTCATCTCACTGTAcagaaacttctccaatgtgTTGATGGAACGCCTTGATGAAGCATTTGGAGCTAGAACGCTGCGTGAACTAAAGTCTGCTCATGCTGATATAATGGCAGTTGATTCTGAAGAACCGTCAGCAATGGAATTAGACAATGAGAATGGGAAATCTCAAAACAGTCAGTCAAATGGCGGAAAGACAGGCAATGCTTATAATGTGGATGAAAAAAAGCAATGGTGTATCACCACTTTGGGCTATGTCAAGGCTTTTTCTAGGCAGTATGCTTCTGAGATTTGGCCTCATATTGAGAGGTTGGATGCAGAAGTATTTACAGAAGATACACCACCTCTTTTACGGGAAGCGGTTTATTCTGGTCTAAGAAGAGCAATTAATTA 2588 0.4057 MSSWKSLLLRIGDKCPEYGTSSDFKEHIETCFGALRRELEHSGADILQFLLQCAEQLPHKISLYGTVIGLINLENEEFVKKLVEKTYTNFQDALDSGNFNSIRILMRLMTVMMCSKVLQPGSLVVVFETLLSSAATTVDEEKGNPSWQPCADFYITCILSCLPWGGAELVEQAPEEIERVMVGIEAYLSIRRPTSDTGLSFFEKDDETERSPGDKDFLEDLWDRVQVLSSNGWKVDSVPRPHLSFEAQLVAGKSHEFGPINCPNSPNPPSEPSGIAYDRQKHEAELKYPQRIRRLNIFPPSKIQDLQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLMLPHPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRTLFDKIADLDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPGLEELLPPKGGPNFSFGAEDGEEKTEHVLSGELNNMVKGRAPVREIISWIDENVLPNNGLEVTLGVVVQTLLNIGSKSFTHLIIVLERYGQVFAKVCPDQDKQVMLIAEVSSFWKSNTQMTAIAIDRMMGYRLVSNLAIVRWVFSTENIDQFHISDRPWEILRNAISKTYNRISDLRKEILSLKRNISSAEEAAKESKAELDAAESKLSLVDGEPVVGENPVRLNRLRSHAEKAKEEVVSLRESLEAKEALLARAIDENEELFISLYRNFSNVLMERLDEAFGARTLRELKSAHADIMAVDSEEPSAMELDNENGKSQNSQSNGGKTGNAYNVDEKKQWCITTLGYVKAFSRQYASEIWPHIERLDAEVFTEDTPPLLREAVYSGLRRAIN 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01903 862 Pfam MIF4G domain 20 195 IPR003890 GO:0003723|GO:0005515
Bva04g01903 862 SUPERFAMILY ARM repeat 294 478 IPR016024 -
Bva04g01903 862 Coils Coil 695 729 - -
Bva04g01903 862 Gene3D - 3 269 - -
Bva04g01903 862 Coils Coil 637 685 - -
Bva04g01903 862 MobiDBLite consensus disorder prediction 775 801 - -
Bva04g01903 862 SUPERFAMILY ARM repeat 2 296 IPR016024 -
Bva04g01903 862 MobiDBLite consensus disorder prediction 782 800 - -
Bva04g01903 862 PANTHER CAP BINDING PROTEIN 2 860 IPR027159 GO:0000339|GO:0005846|GO:0006406
Bva04g01903 862 Gene3D - 490 855 - -
Bva04g01903 862 Pfam MIF4G like 500 827 IPR015174 GO:0016070
Bva04g01903 862 Gene3D - 298 481 - -
Bva04g01903 862 SMART if4_15 8 229 IPR003890 GO:0003723|GO:0005515
Bva04g01903 862 Pfam MIF4G like 344 467 IPR015172 GO:0016070
Bva04g01903 862 SUPERFAMILY ARM repeat 478 852 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01903 Bva-Chr4 19385729 19397351 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01903 K12882 - gmx:100811738 1454.88