Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01895 ATGAATTATTTTCCCGACGAGGTATTAGAGCACGTCTTCGACTACGTAACGTCTCACCGGGACCGGAACTCCGTGTCCATGGTGTGTAAAACCTGGTACAGAGTTGAGAGATGTAGCCGGGAGAGAATTTTCATTGGGAATTGTTACTCGATCAGTCCTGAGAGGCTGATCCAGAGGTTTCCTGGTCTTAAATCTCTAACCTTGAAGGGTAAACCTCATTTTGCGGACTTCAATCTGGTTCCTCATGAATGGGGAGGCTTTGTTTATCCTTGGATTGAAGCACTGGCTAAGAGTAAGATTGGATTGGAAGAGCTTAGGTTGAAGAGGATGGTGGTTACTGATGAGAGCCTGGAGCTACTTTCCCGTTCTTTTGTGAATTTCAAGTCTCTAGTTCTTGTTAGCTGTGAAGGGTTCACCACCGATGGCCTTGGGGCTATAGCTGCAAATTGCAGGTTTCTTAGGGAGCTGGACctgcaagaaaatgaaattgaggATAAAGGAGGGCAGTGGCTTAGCTGCTTTCCTGATAGCTGTACAACAATGGTCTCTCTTAATTTTGCTTGTCTTAAAGGAGAGATTAATTTGGGTACTCTTGAGAGACTTGTTGCTAGATCTCCTAATCTGAAGAGTTTAAGGGTAAATCGCTCTGTGCCACTCTACACTCTCCAAAGGATATTGATGCGAGCACCTCAGCTTGTGGACTTGGGTACCGGGTCTTTTGTCAGTGATCCTGGCTCTGAGATTTTCACCAAGCTAAAAAATACCATAATGAAGTGTAAATCAATAACCAGTTTATCTGGATTTCTGGAGGTTGCTCCTCGATGCTTATCAGCAATATATCCTATTTGCTTAAACTTAACATCCTTGAACCTTAGCTATGCAGTGGAGCTTCGTGGTCATGACCTAATAAAGCTCATTCGCCACTGTGGGAAACTTAAACGCTTATGGATATTGGATTGCATAGGAGACAAAGGACTTGGCGTTGTAGCTTCCACATGCAAAGACTTGGAGGAATTGAGGGTCTTTCCATCAGTTGTCTTTGGGGTTGGACCTTCAGCTGTGACAGAAAATGGACTGGTGGCAATATCCATGGGTTGCCCAAAGCTTCACTCATTGCTTTATTTCTGCCAGCAGATGACTAATGCAGCCCTCATAACAGTGGCTAAGAACTGCCCAAATTTCATCCGCTTTAGGTTGTGCATCCTCGATGCGACAAAACCTGATCCTGATACAATGCAGCCACTGGACGAAGGTTTTGGGGCAATTGTACAGTCATGCCGGCGGCTCAGGCGTTTGTCACTCTCTGGCCTCTTGACCGATAAGGTTTTCCTTTACATCGGAATGTATGCTGAGCAGCTTGAAATGCTGTCTATTGCATTTGCCGGAGAAAGTGACAAGGGAATGCTCTATGTGTTGAATGGATGTAAGAAACTCCTCAAGCTTGAGATCAGAGATTGCCCTTTCGGCAACACGGCTCTTCTGACGGACATAGGGAAGTATGAAGCAATGCGATCCCTTTGGATGTCCTCGTGTGAAGTCACCCTAGGAGCCTGCAAGACAGTTGCCAAGAGTATGCCAAGACTAAACGTGGAGATCATAAATGATAACGAACGGCCTTCTCAGTGTACTCTCGATGATGCCCAGAAAGTAGAGAAGATGTACTTGTACCGAACATTGGTCGGGAAAAGGAAGGATGCACCAGAATTCGTATGGACTCTCTA 1721 0.4492 MNYFPDEVLEHVFDYVTSHRDRNSVSMVCKTWYRVERCSRERIFIGNCYSISPERLIQRFPGLKSLTLKGKPHFADFNLVPHEWGGFVYPWIEALAKSKIGLEELRLKRMVVTDESLELLSRSFVNFKSLVLVSCEGFTTDGLGAIAANCRFLRELDLQENEIEDKGGQWLSCFPDSCTTMVSLNFACLKGEINLGTLERLVARSPNLKSLRVNRSVPLYTLQRILMRAPQLVDLGTGSFVSDPGSEIFTKLKNTIMKCKSITSLSGFLEVAPRCLSAIYPICLNLTSLNLSYAVELRGHDLIKLIRHCGKLKRLWILDCIGDKGLGVVASTCKDLEELRVFPSVVFGVGPSAVTENGLVAISMGCPKLHSLLYFCQQMTNAALITVAKNCPNFIRFRLCILDATKPDPDTMQPLDEGFGAIVQSCRRLRRLSLSGLLTDKVFLYIGMYAEQLEMLSIAFAGESDKGMLYVLNGCKKLLKLEIRDCPFGNTALLTDIGKYEAMRSLWMSSCEVTLGACKTVAKSMPRLNVEIINDNERPSQCTLDDAQKVEKMYLYRTLVGKRKDAPEFVWTL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01895 573 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 2 570 - -
Bva04g01895 573 Gene3D Ribonuclease Inhibitor 41 573 IPR032675 -
Bva04g01895 573 SMART fbox_2 4 45 IPR001810 GO:0005515
Bva04g01895 573 Pfam F-box 2 41 IPR041567 -
Bva04g01895 573 Pfam Transport inhibitor response 1 protein domain 61 107 IPR041101 -
Bva04g01895 573 PANTHER PROTEIN AUXIN SIGNALING F-BOX 3 2 570 - -
Bva04g01895 573 SMART LRR_CC_2 366 390 IPR006553 -
Bva04g01895 573 SMART LRR_CC_2 283 308 IPR006553 -
Bva04g01895 573 SMART LRR_CC_2 99 123 IPR006553 -
Bva04g01895 573 SMART LRR_CC_2 309 332 IPR006553 -
Bva04g01895 573 SMART LRR_CC_2 426 449 IPR006553 -
Bva04g01895 573 SMART LRR_CC_2 124 149 IPR006553 -
Bva04g01895 573 Gene3D - 1 40 - -
Bva04g01895 573 SUPERFAMILY RNI-like 16 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01895 Bva-Chr4 19337572 19340893 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01895 - - gmx:100812516 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01895 04 19337572 19340893 Bva04g01895 04 19337572 19340893 ECH