Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01889 ATGGGGTGCGCTTACTCTATGTATGCACTTGGAAGGAACAAGAAAACAAGCATCGCTGAAGTTGTGGTCTTTGTTCCATCAATACGAATTCCTGTACATTCTGATCTCCAAAGGGCCCTTAGAGGGATAGTTCCAAAGGATCTTGCTGACAAATTGTCTTCACTTAGAAATCAGATAGTGTTAGTGGCAGAAGATACCGGTGGATCTGCAATAGCAGAACTCCGTCGAGCTTTGAATGAATACTTGTCAGTTCTGATTGGGATCACTAAGAAAGATTATGCTCTTGAGGGACTGATAGAATTCAAGTGGAAGAATTTCCACGATGGGCGACAAGATAGTTGTTTGGCAAATGCTTGGTTTGAGGTGTTATCTGCACTTCACCTTATGGCAATGCTGACATTGTCAGAGGCTGACTCTTTGATGATACCAAAGGACAATTCGGGTTCTGGAATAAGAGTTGTATCTTCAGATAGCAAGAGGGAAGCAGTTGATTTGTTACTCAAGGTATCAGGATACTTGGAGTTCTGTGTCAGGAATGTTCTTCCTCGAATACCACTTGAAATTAAGAAAAATTTACCCCAAGAATTGCAGGAGGAAATATTGGAGGCCATCTCCATTCAAGCACTAGCTCAGGGAACTGAAATCCAGCTTGGCCTTGCTGTTGAAAGTCAGAAGGCAACTTTGTCTGTGAAGAGGAGGTTGGCATGTGAACAGCTGGTTTACTGTATTCAGGCCTACCATTGCCTATCAGGCTTTGACTTCAACCAAGGGTATAAAAAGAAGCATATCCGATTCATCAAATGGAAATTCCTTGAAGCGAAGGCCGCAGCTTACTACTACCATGGTTTGATCCTTGACAAGGGTAGTGAACCAACCAGTCACATTGGTGCAGTATCCTGTTTTCTTGCAGCTCAAGAACTTCTAGCTGAGAGCAAGAAGGCCTGCTTAAGCTTTTGTCTTGCAGCTCCAGTGACCAGGACTCCTCCACTCTGGGGTGCCATGAAACTTTTGCATCAGAAAATTCCAGAAGTGGCTTCAAGGAAGTCTCAGATGTATGGCTACCTCTTGGAGCAAGAGAAGGGTCTCCAATCTTTGCCTGATCTACCTGAGTTTCAATTATCACTACGTCCAGATGACTATGAACTGCCAGAAATAGATCCAGCGTGGGATAACGAAAACTGGGAAAATCTTGGAGAGCCCTTAAAAGTGCACCTTAGAGACAGTGAAGATGAGATTCCAACTCAATA 1247 0.4362 MGCAYSMYALGRNKKTSIAEVVVFVPSIRIPVHSDLQRALRGIVPKDLADKLSSLRNQIVLVAEDTGGSAIAELRRALNEYLSVLIGITKKDYALEGLIEFKWKNFHDGRQDSCLANAWFEVLSALHLMAMLTLSEADSLMIPKDNSGSGIRVVSSDSKREAVDLLLKVSGYLEFCVRNVLPRIPLEIKKNLPQELQEEILEAISIQALAQGTEIQLGLAVESQKATLSVKRRLACEQLVYCIQAYHCLSGFDFNQGYKKKHIRFIKWKFLEAKAAAYYYHGLILDKGSEPTSHIGAVSCFLAAQELLAESKKACLSFCLAAPVTRTPPLWGAMKLLHQKIPEVASRKSQMYGYLLEQEKGLQSLPDLPEFQLSLRPDDYELPEIDPAWDNENWENLGEPLKVHLRDSEDEIPTQ 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01889 415 PANTHER UNCHARACTERIZED 1 412 IPR038898 -
Bva04g01889 415 Gene3D alix/aip1 like domains 36 398 IPR038499 -
Bva04g01889 415 PANTHER ENDOSOMAL TARGETING BRO1-LIKE DOMAIN-CONTAINING PROTEIN 1 412 - -
Bva04g01889 415 ProSiteProfiles BRO1 domain profile. 6 415 IPR004328 -
Bva04g01889 415 CDD BRO1_Alix_like 14 378 - -
Bva04g01889 415 SMART BRO1_2 22 385 IPR004328 -
Bva04g01889 415 Pfam BRO1-like domain 50 313 IPR004328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01889 Bva-Chr4 19307511 19310313 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01889 - - gsj:114399503 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01889 04 19307511 19310313 Bva04g01889 04 19307511 19310313 ECH