Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01874 ATGCCTGAGGAAGACTTGGTGGAGCTTAAGTTCCGTCTCTATGATGGATCAGATATTGGACCCTTCCGCTATTCACCAGCTTCCACGGTAGCCATGCTCAAGGAGAGAATTGTAGCAGAGTGGCCAAAAGATAAGAAAATTGTACCAAAGGCAGCAAATGacataaaactaataaatgctgggaaaattttggaaaacaacAAGACGATCAGCCAGTGTAGAACTCCTTTTGGTGATCTTCCAATCACAATGCATGTTGTCGTTCAACCATCTTTGGCCAAAGCGAGACCAGAGAAAAAGGTTGATGAAGTACCAAGAAAACATATATGTTCATGTACGATATTGTA 347 0.3804 MPEEDLVELKFRLYDGSDIGPFRYSPASTVAMLKERIVAEWPKDKKIVPKAANDIKLINAGKILENNKTISQCRTPFGDLPITMHVVVQPSLAKARPEKKVDEVPRKHICSCTIL 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01874 115 Gene3D - 1 96 - -
Bva04g01874 115 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 115 IPR040015 -
Bva04g01874 115 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 113 IPR039540 -
Bva04g01874 115 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 1 115 - -
Bva04g01874 115 PIRSF MUB 1 115 IPR017000 -
Bva04g01874 115 SUPERFAMILY Ubiquitin-like 2 93 IPR029071 -
Bva04g01874 115 CDD Ubl_MUBs_plant 6 90 - -
Bva04g01874 115 ProSiteProfiles Ubiquitin domain profile. 7 73 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01874 Bva-Chr4 19225608 19229583 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01874 - - egr:104419120 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01874 04 19225608 19229583 Bva04g01874 04 19225608 19229583 ECH
Bva03g00265 03 1604144 1610532 Bva04g01874 04 19225608 19229583 ECH