Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01836 ATGTGcgcagaaaaagaaacaggGAGCAAAAAAGGAGAGCACTTGTCTACAAATGACAGTAGTTTGAGTAGTAAAAAAGCATTGCCCGTCAGGAGCAGTGGAAGTGGGTTTTGGGTTAGCTCTCATAGTTCCCCAACAGAAAAGATGCGGGTTTGCGAGAACAAGGCTAAACCAGAGCTGAAATGGCACGAAATGCCTCCCTCTAAGAGCAATGATGATTCCTCAGGTGAAAAACCCCAGGATGCAGATTACAATCTTCCGAGTCTCAGTGATGAGATAGAGACATTGATCATGGCTAGAGTTCCAAGATCAGAGTActggaaattttcttttgtaaacaAGAGATTTTTAGGTTTGTTGAAGACTGGTGAAGTCTATAAAATCAGGAGGCAAATAGGATTCAAGGAACCATCTGTGTTTATGTTCGCAGATGGAGAGACCAACTGGTGTGCATTTGATCAGCATTTCATGCATCGAAGAAAGCTCCCCGTTATTCCATcagatgatattatttttgagtatTGCGATAAGGAGTCATTTTCTGCTGGGACCAATCTGTTTGTCTTAGGCCAGGAGTTAGCTGGAGCTGTTATTTGGAGGTATGAATTGGCAACAAATAAATGGCTCAAGAATCCTTCTATGATCAGCCCAAGGTGTCTTTTTGCTTCAGCCACCTGTGGCACCTTTGCTTATGTGGCTGGTGGCCTGGACTTAAGTGGTGGCCACAAAGTCTCGAATTCTGCAGAGAAATACAATGCAGAGAGTGACTCTTGGGAGTCCCTCCCACCCATGAATAAGAAGAGGAGGAATTGCTCGGGTTGCTACATGGATAACAAGTTCTATGTAATTGGAGGGCAAGATGATGTTCAAAAAGATCTCAGTTGTGGGGAATGCTTTGATGAAAAGACAAAGGAATGGAGCTTGATTCCTGACATGTTGAAAGACATCCCTGTTTCAACTGCACAATCTCCACCTCTTGTTGCTGTTGCCAATAATGAACTTTACACAGTGGATGCCTCTTCAAACGAGCTAAAAGTATACTTGAAGGCAAGCAACTCGTGGAGAAAGATAGGACCAGCTGTTCCAGTTAGAGCTGATGCTAGAAGAGGTTGGGGAGTTGCATTCAAGTCCCTGGGAAATGAGCTGCTTGTCATTGGTTCAACATCTGCAGATGGTGCACGGCGTGCCTCCATATACACTTGCTGCCCAGATCCAGCTCTTGAGACACTGCAATGGAGGGAGATTAAGTGTGGCACTCAGCTTAATCCCTTTATTCGTAACTGTGCTGTAATGATAGCTTG 1301 0.4266 MCAEKETGSKKGEHLSTNDSSLSSKKALPVRSSGSGFWVSSHSSPTEKMRVCENKAKPELKWHEMPPSKSNDDSSGEKPQDADYNLPSLSDEIETLIMARVPRSEYWKFSFVNKRFLGLLKTGEVYKIRRQIGFKEPSVFMFADGETNWCAFDQHFMHRRKLPVIPSDDIIFEYCDKESFSAGTNLFVLGQELAGAVIWRYELATNKWLKNPSMISPRCLFASATCGTFAYVAGGLDLSGGHKVSNSAEKYNAESDSWESLPPMNKKRRNCSGCYMDNKFYVIGGQDDVQKDLSCGECFDEKTKEWSLIPDMLKDIPVSTAQSPPLVAVANNELYTVDASSNELKVYLKASNSWRKIGPAVPVRADARRGWGVAFKSLGNELLVIGSTSADGARRASIYTCCPDPALETLQWREIKCGTQLNPFIRNCAVMIA 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01836 433 MobiDBLite consensus disorder prediction 48 79 - -
Bva04g01836 433 MobiDBLite consensus disorder prediction 14 47 - -
Bva04g01836 433 SUPERFAMILY Kelch motif 144 404 IPR015915 GO:0005515
Bva04g01836 433 SMART kelc_smart 185 228 IPR006652 GO:0005515
Bva04g01836 433 SMART kelc_smart 279 332 IPR006652 GO:0005515
Bva04g01836 433 SMART kelc_smart 231 278 IPR006652 GO:0005515
Bva04g01836 433 MobiDBLite consensus disorder prediction 1 86 - -
Bva04g01836 433 Pfam Kelch motif 268 312 IPR006652 GO:0005515
Bva04g01836 433 Pfam Kelch motif 217 265 IPR006652 GO:0005515
Bva04g01836 433 Gene3D - 127 420 IPR015915 GO:0005515
Bva04g01836 433 PANTHER KELCH REPEAT F-BOX PROTEIN 13 432 - -
Bva04g01836 433 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 13 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01836 Bva-Chr4 19056993 19059452 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01836 - - ccaj:109807283 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01836 04 19056993 19059452 Bva04g01836 04 19056993 19059452 ECH