Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01823 ATGGCTTCCGCTGCAAAAGAAGATAATCCAAGATCTACAAAAAGAGTCGCTGTTGTTGGTGCTGGTGTAAGTGGGCTTGCTGCTGCGTACAAATTGAAATCACATGGTCTGAATGTCACTATATTTGAAGCTGAAGGAAGAGCTGGAGGGAAGTTAAGAAGTGTTGCACAGGATGGTCTCATTTGGGAAGAGGGAGCAAATACAATGACTGAAAGTGAGATGGAGGTTAAAGGTTTGATCGATGATCTTGGGCTTCAAGAAAAGCAGCAATTTCCAATTTCACAGCATAAGCGCTATATTGTGAGAAATGGGATGCCACTTCTGGTACCCACCAATCCTGCTGCGCTGCTTAAGAGCAGTCTTCTTTCAGCACACTCAAAGTTCCAGATCATTTCTGAACCCTTTGTGTGGAAAAAACAAGATCCCTCCAAGGTGTGTGATGAATATACAGAGGAGAGTGTTGGTGGATTCTTTCAGCGTCATTTTGGAAAAGAGgtCGTGGATTATCTGATTGATCCCTTTGTTGCGGGTACAAGTGGAGGAGATCCTGAGTCTCTTTCTATGCGCCATTGTTTTCCAGAGCTATGGAATTTAGAGAAAAGGTTTGGTTCCATTATATCTGGGGCTTTGCAATCAGTCTTTTctgcaaaaagagaaaaaactgAAGGAAATAAgggaaaattagaaaagaagaagcataaGCGtggttcattttcttttcagggTGGGATGCAGACATTGACTGATACATTGTGCAAAGAAATTGGTGAAGATGCTCTCAAGTTAAACGCAAAGGTTTTATCATTATCTTACTGTCCTGGAAATTCTTCATCAGAAAATTGGTCTATTTCTGCTTCTAACAAGGATACACAAACTATTGATGCAGTAATTATGACGGCTCCTCTATCTAATGTCAAAGATATGAAGATCACAAAAGGGGGAACCATCTTTCCACTTGATTTTCTTCCTAAGGTGACCTATGTTCCCTTATCAGTCTTAATAACCAgctttagaaaagaaaatgtgaagagACCCCTTGAGGGATTTGGAGTTCTTGTTCCTTCAAAAGAGCAACAAAATGGTTTAAGAACCCTTGGTACTCTCTTTTCATCTATGATGTTTCCCGACCGTGCACCTAATGATTTATATCTCTATACCACCTTCATTGGAGGAACTCGAAACAAGGAATTGGCGCAAGCTTCAACTGATGAGCTAAAGCAGATTGTTAGTTCTGACTTGAGAAAATTATTGGGAATCGAGGGAGAGCCCACCTTTGTCAATCATTTCTATTGGAACAAAGGGTTTCCGTTGTATGGGCGTAACTATGGTTCAGTTCTAGAAGCAATTGACAAGATGGAAAAAGATCTACCTGGATTCTTCTATGCAGGTAATCACAAGGATGGACTCTCTGTCGGCAAATCAATTGCTTCGGGGTGTAAAGCAGCTGATCTTGTAATTTCATATCTCAACTCTACTTCAGGTGACGACGTGCCTGGGGGAGGGCTATCAATGTA 1514 0.3897 MASAAKEDNPRSTKRVAVVGAGVSGLAAAYKLKSHGLNVTIFEAEGRAGGKLRSVAQDGLIWEEGANTMTESEMEVKGLIDDLGLQEKQQFPISQHKRYIVRNGMPLLVPTNPAALLKSSLLSAHSKFQIISEPFVWKKQDPSKVCDEYTEESVGGFFQRHFGKEVVDYLIDPFVAGTSGGDPESLSMRHCFPELWNLEKRFGSIISGALQSVFSAKREKTEGNKGKLEKKKHKRGSFSFQGGMQTLTDTLCKEIGEDALKLNAKVLSLSYCPGNSSSENWSISASNKDTQTIDAVIMTAPLSNVKDMKITKGGTIFPLDFLPKVTYVPLSVLITSFRKENVKRPLEGFGVLVPSKEQQNGLRTLGTLFSSMMFPDRAPNDLYLYTTFIGGTRNKELAQASTDELKQIVSSDLRKLLGIEGEPTFVNHFYWNKGFPLYGRNYGSVLEAIDKMEKDLPGFFYAGNHKDGLSVGKSIASGCKAADLVISYLNSTSGDDVPGGGLSM 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01823 504 Pfam Flavin containing amine oxidoreductase 23 486 IPR002937 GO:0016491
Bva04g01823 504 Gene3D protoporphyrinogen ix oxidase, domain 3 109 215 - -
Bva04g01823 504 PANTHER PROTOPORPHYRINOGEN OXIDASE 12 489 - -
Bva04g01823 504 Gene3D - 15 482 IPR036188 -
Bva04g01823 504 SUPERFAMILY FAD-linked reductases, C-terminal domain 327 436 - -
Bva04g01823 504 Gene3D Protoporphyrinogen oxidase, mitochondrial; domain 2 51 438 - -
Bva04g01823 504 TIGRFAM proto_IX_ox: protoporphyrinogen oxidase 13 490 IPR004572 GO:0004729|GO:0006779
Bva04g01823 504 PRINTS Adrenodoxin reductase family signature 38 51 - -
Bva04g01823 504 PRINTS Adrenodoxin reductase family signature 15 37 - -
Bva04g01823 504 PANTHER PROTOPORPHYRINOGEN OXIDASE 12 489 - -
Bva04g01823 504 SUPERFAMILY FAD/NAD(P)-binding domain 10 489 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01823 Bva-Chr4 18979302 18985712 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01823 K00231 - gmx:547941 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01823 04 18979302 18985712 Bva04g01823 04 18979302 18985712 ECH