Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01819 ATGTTCAGCTCTCAGACTCTTGTTTCAAGTAAAGGTCCTTTAGGCGCCATATGGGTTGCTGCTTACTGTTTGAAAAGGCTCAAGAAATCTCAGGTCAAAGAGACGGACATTTCCACCTCTGTTGATAAGATTTTGCAAGAAATAAATGCTGTTACATATAGAATACTGGCCTATCTTCTTCTTGGTGTTGTGAGGATATATTCCAAAAAGgttgaatatttgtttgatgACTGTAACGAGGTGCTCTCTGCAATCAAGAAATTTGTGGTTAATACACAAAATAATGCACGTATGGAATTGGAGACTTTGCGTATGCATATTACTCTACCGGACAAGTTTGAGCTTGATGCTTTTGATCTAGACATACTTGAAGATGTTGCTATAGGTAACGTTGCTTCCAGAGAAGAAATAACCCTGAAAGATGTTTTCTGGAAAGACGAGGGTATTGCACGGTTTTATTTGGACGAGTATCTGTCAGAAGAAGAGTTTGAAACATGTCCAAATACGTGTACTACTGATAACCCTATGGCAGAAGATACTATTCAATTTCACCTAATGGACAATGACTTCAACTCTAGTGCACCAAATCGTTTAATTAACTCACAAGCAGGCAGGGAGAAATCCCACAACACTGTATTCCCTCAGCAGGAACCGATGGACCTTGACACTGATCTTGTTGACAGAGAACCTAAAAATCCTGCAAATGATTTGTGTAGGGAAGAGCAACATATTAATGAAGAGGAGATAACAATTCAAGAAACTGAACAATTTGAAGATGAAATGTGTCTAAGAAGTATAGAGAAGATCTGTAGACTCTATCAAGAAGAATCTGTGGAAACCAGTATGTTGCATGGGGGAGAGCAGGAGCCTGTGGTTCTTGATGAAACATTTGTTGAATCTGATTTGGTTGATGAAGAGCAGATTATGGCTACGGAAATGGCAATGTCAGAAAACAGGATGCAAATGGAAATTGGAGCTGTTCACGAGGCTAGTAATTCACAAGTAAGTACGGAAGGGCTTCAAGATACATTGAAAGAACAGTCCATGGACCATGATAAATTTTCTGCTGCTGAGCTTGGTGAGCACATTGATGGGTCTTTTGAAGAGCATCAGAACAAAGACAAATTAGACTCCAAAGGAAAGGTTTCAGCTGAAGAAGGAAATTTTCAAGCTATTGGGCCAGAGTCAATTAATCTTGATGGAACTCCTGAATCCAAGTTTCCAGATGCTTCAGATGCAAGACCAAAAGCAGGTGCCACTACGCCAGACTTTATGCTTATTCCTACACCTTCTGCAGCAGAGCCTGCACGCTTTtctaggaaaagaaaatgcatttgGGATAAAAACGTAGTGTTTTCAAACGAGGTACTTAGACACTGGATAAGAAAATCAAGTGACTTAATTCGCCGCAGAAAATCTCTTCATAATCTTTCTGCTGCACGGAGGGCCTCTCGTATATCTAGTCTTCCTGAGGGATTCTCTGAATCTTTGCTGCCTTgTCACTCATTAGAACTTCAATCATtgttctcaaaaaataaaatgaagatagAATCCTTGGAAAACATGGAAACTCCAGGAAGTTTAGACGAAGCAGACACCCAGACTGTTGGCAGGGCAGTGGAAACTCCTGAATGTTTTGATGTGTCAGAAGCTCAGGTTGTTGGTATGCCAGAGCCCGTGGACACTGCCCCAAAAACCCCTCCTCTTAGCTCAACAATTAGGTCATTTGAGAGCCCAGAGAGCCCTCAAATTGCAAACTTTAATATGAGCCCGTCAAATCCACAAGAAAGAATAGAGAAAGTGCAGACTTTGCACAAGGATGAAAAACTTAATCTGATGAAAGAGTGCAATGTAAAAACAAGTTCATATGAGGAGCACTCTTTGGAAAGGGATGAAGAACTTACTCGGATGAATGAGTGCAACGTAAGAACTTCAAGTTCATATGAAGAGCACTCTTTGGAAAAGGATGAGGAACTTACCCTGATGAATGAGGAGATAAATTCATGTGAAACAGATAATCAGGAAATGTTTGGCTGGTCTGGGCGAACCATGCAAGTTGGGAGGTTCTTGCACAAGATTTTTCAgaatataaaaggaaaggaCTTGAACTTGTCACAAGTTTTGGGTAAACGAACCCGGAAAGATTGTGCGAAGCTATTTTATGAAACACTGGTTTTGAAATCTACAAGCTGTGTAGATGTGAAGCAAGATAATGCTTATGGTGATATTTTACTCTGGAAACTCCCCAAATTGGATCAAACTTTTGGAGTTCATGGTGACTCATA 2285 0.3912 MFSSQTLVSSKGPLGAIWVAAYCLKRLKKSQVKETDISTSVDKILQEINAVTYRILAYLLLGVVRIYSKKVEYLFDDCNEVLSAIKKFVVNTQNNARMELETLRMHITLPDKFELDAFDLDILEDVAIGNVASREEITLKDVFWKDEGIARFYLDEYLSEEEFETCPNTCTTDNPMAEDTIQFHLMDNDFNSSAPNRLINSQAGREKSHNTVFPQQEPMDLDTDLVDREPKNPANDLCREEQHINEEEITIQETEQFEDEMCLRSIEKICRLYQEESVETSMLHGGEQEPVVLDETFVESDLVDEEQIMATEMAMSENRMQMEIGAVHEASNSQVSTEGLQDTLKEQSMDHDKFSAAELGEHIDGSFEEHQNKDKLDSKGKVSAEEGNFQAIGPESINLDGTPESKFPDASDARPKAGATTPDFMLIPTPSAAEPARFSRKRKCIWDKNVVFSNEVLRHWIRKSSDLIRRRKSLHNLSAARRASRISSLPEGFSESLLPCHSLELQSLFSKNKMKIESLENMETPGSLDEADTQTVGRAVETPECFDVSEAQVVGMPEPVDTAPKTPPLSSTIRSFESPESPQIANFNMSPSNPQERIEKVQTLHKDEKLNLMKECNVKTSSYEEHSLERDEELTRMNECNVRTSSSYEEHSLEKDEELTLMNEEINSCETDNQEMFGWSGRTMQVGRFLHKIFQNIKGKDLNLSQVLGKRTRKDCAKLFYETLVLKSTSCVDVKQDNAYGDILLWKLPKLDQTFGVHGDS 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01819 761 Pfam Conserved region of Rad21 / Rec8 like protein 700 746 IPR006909 -
Bva04g01819 761 MobiDBLite consensus disorder prediction 393 428 - -
Bva04g01819 761 MobiDBLite consensus disorder prediction 557 579 - -
Bva04g01819 761 Gene3D Structural maintenance of chromosome 1. Chain E 681 755 IPR023093 -
Bva04g01819 761 SUPERFAMILY "Winged helix" DNA-binding domain 682 751 IPR036390 -
Bva04g01819 761 Pfam N terminus of Rad21 / Rec8 like protein 1 101 IPR006910 GO:0005515
Bva04g01819 761 PANTHER SISTER CHROMATID COHESION 1 PROTEIN 2 1 756 - -
Bva04g01819 761 PANTHER SCC1 / RAD21 FAMILY MEMBER 1 756 IPR039781 GO:0007062|GO:0008278
Bva04g01819 761 MobiDBLite consensus disorder prediction 565 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01819 Bva-Chr4 18950756 18958232 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01819 K06670 - qsu:112016663 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01819 04 18950756 18958232 Bva04g01819 04 18950756 18958232 ECH