Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01202 ATGGCCATGAAGAAGGAGGCAATAGTTCTATACCCAACAGCTGCCATAGGCCACCTGGTTTCCATGGTAGAGTTAGGCAAATTCATACTCACTCACCAACCATCTCTGTCCATTCACATCCTCACCACCGTTGCACCCTACGACGCCGGCTCCACCGCCCGGTACATCTCCGGTGTCTCCGGCACCGTTCCTTCAATCACTTTCCACAGCCTCCCTGCTGTTACTCTTCCTCCCTCCATACACTCAACAGCTAACCATGAAACCCTCACTTTTGAGGTTCTTCGTCTCAACAACCCAAATGTACACCAAGCTCTTTTGTCAATCTCCAAAGGCTATACCATCCATGCCCTTATTTTGGACTTCTTTTGCTCTCAAGCAATCTCTGTTGCCTCCCAACTCAACATCCCTGCCTACTGTTATTTTACAAGTGGCGCTGCTTGCTTTGCCATGTTTATGTACCTCCCAACTATTCACAACACAACCAATAAGAGCTTCAAAGAACTCAACACTCATCTCAACTTCCCTGGCTTGCCACCCATGCCCAGCTGGGACATACCACCACCACTACTTGATCGTGACGACCCAGCCTATAAAAGCTTTCTGAATTGCTCTGTTCTCACACCCAAAACAGCTGGGATTATTATTAACACATTTGAAGCTCTAGAACCCACAAGTCTCAAAGCACTGTCCGATGGATCCTGCATACCTGACGGTACAACACCACCTTTTTATTGCATAGGTCCTTTAATAGTGGCAAATAATCAAACAGGTGGTGAGCATGAGTGTTTGAATTGGCTTGACTCGCAGCCCAGCAAGAGCGTTGTGTTTTTGTGTTTTGGGAGTTTGGGTGTGTTCTCTAAGGAGCAGTTAAAGCAAATAGCTGATGGGTTGGAGAGAAGTGGCCATAGATTCTTGTGGGTAGTACGCAACCCACCATCAGAGGAAAGCAAGAATCTTGCTGATAGTTCCCAGAATGACCCAGATTTGGATTCGTTGCTACCTGAGGGTTTCTTGGCTCGGACGAAAGAGAGAGGCTTTGTGGTGAAGACATGGGCGCCGCAGGTGGCGGTGCTCAATCACGAAGCCGTGGGTGGGTTCGTGACTCACTGTGGATGGAATTCGACGCTGGAAGCAGTGTGCGGTGGCGTGCCCATGATTGCTTGGCCTCTGTATGCGGAGCAGAGATTGAATAGGGTGGTGTTAGTAGAAGAAGTCAAGATTGGGCTATGGATGCATGAATCGGAATCTGGGTTGGTAATGGCGAATGAGGTGGAGGAGCGAGTTAGAGAACTGATGGAATCGGAGAAAGGTGAGCTGGTAAGGAACCGAGTCATGGCTGTCAAAGCTGAAGCTAAGGCTGCGTTGCTTGAAGGTGGGTCTTCCTCCGTCGCATTGCGCAAACTCGTTCAGtcatggaagaaaaaata 1427 0.4849 MAMKKEAIVLYPTAAIGHLVSMVELGKFILTHQPSLSIHILTTVAPYDAGSTARYISGVSGTVPSITFHSLPAVTLPPSIHSTANHETLTFEVLRLNNPNVHQALLSISKGYTIHALILDFFCSQAISVASQLNIPAYCYFTSGAACFAMFMYLPTIHNTTNKSFKELNTHLNFPGLPPMPSWDIPPPLLDRDDPAYKSFLNCSVLTPKTAGIIINTFEALEPTSLKALSDGSCIPDGTTPPFYCIGPLIVANNQTGGEHECLNWLDSQPSKSVVFLCFGSLGVFSKEQLKQIADGLERSGHRFLWVVRNPPSEESKNLADSSQNDPDLDSLLPEGFLARTKERGFVVKTWAPQVAVLNHEAVGGFVTHCGWNSTLEAVCGGVPMIAWPLYAEQRLNRVVLVEEVKIGLWMHESESGLVMANEVEERVRELMESEKGELVRNRVMAVKAEAKAALLEGGSSSVALRKLVQSWKKK 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01202 475 PANTHER UDP-GLYCOSYLTRANSFERASE 88A1-LIKE 6 475 - -
Bva04g01202 475 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 261 401 IPR002213 GO:0008194
Bva04g01202 475 CDD GT1_Gtf-like 8 456 IPR002213 GO:0008194
Bva04g01202 475 Gene3D Glycogen Phosphorylase B; 260 456 - -
Bva04g01202 475 Gene3D Glycogen Phosphorylase B; 8 461 - -
Bva04g01202 475 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 473 - -
Bva04g01202 475 PANTHER GLYCOSYLTRANSFERASE 6 475 - -
Bva04g01202 475 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01202 Bva-Chr4 8217725 8219291 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01202 3 475 Glycosyltransferase AT3G16520 55.208 8.17e-171 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01202 - - qsu:111988381 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01202 04 8217725 8219291 Bva04g01202 04 8217725 8219291 ECH