Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01201 ATGGCTACGAAGAAGGAGGCAATAGTTCTATACCCAACAGCTGCCATAGGCCACCTGGTTTCCATGGTAGAGTTAGGCAAATTCATACTCACTCACCAACCATCTCTGTCCATTCACATCCTCACCACCGTTGCACCCTACGACGCCGGCTCCACCGCCCGGTACATCTCCGGTGTCTCCGGCACCGTTCCTTCAATCACTTTCCACAGCCTCCCTGCTGTTACTCTTCCTCCCTCCATACACTCAACAGCTAACCATGAAACCCTCACTTTTGAGGTTCTTCGTCTCAACAACCCAAATGTACACCAAGCTCTTTTGTCAATCTCCAAAGGCTATACCATCCATGCCCTTATTTTGGACTTCTTTTGCTCTCAAGCAATCTCTGTTGCCTCCCAACTCAACATCCCTGCCTACTGTTATTTTACAAGTGGCGCTGCTTCCTTTGCCATGTTTATGTACCTCCCAACTATTCACAACACAACCAATAAGAGCTTCAAAGAACTCAACACTCATCTCAACTTCCCTGGCTTGCCACCCATGCCCAGCTGGGACATACCAAAACCACTACTTGATCGTGACGACCCAGCCTATAAAAGCTTTCTGAATTGCTCTGTTCTCACACCCAAAACAGCTGGGATTATTATTAACACATTTGAAGCTCTAGAACCCACAAGTCTCAAAGCACTGTCCGATGGATCCTGCATACCTGACGGTACAACACCACCTGTTTATTGCATAGGTCCTTTAATAGCGGCAAATAATCAAACAGGTGGTGAGCATGAGTGTTTGAATTGGCTTGACTCGCAGCCCAGCAAGAGCGTTGTGTTTTTGTGTTTTGGGAGTTTGGGTGTGTTCTCTAAGGAGCAGTTAAAGCAAATAGCTGATGGGTTGGAGAGAAGTGGCCATAGATTCTTGTGGGTAGTACGCAACCCACCATCAGAGGAAAGCAAGAATCTTGCTGATAGTTCCCAGAATGACCCAGATTTGGACTCGTTGTTACCTGAGGGTTTCTTGGCTCGGACGAAAGAGAGAGGCTTTGTGGTGAAGACATGGGCGCCGCAGGTGGCGGTGCTGAATCACGAAGCAGTGGGTGGGTTCGTGACTCACTGTGGATGGAATTCGACGCTGGAAGCAGTGTGCGGTGGCGTGCCCATGATTGCTTGGCCACTGTATGCGGAGCAGAGATTGAATAGGGTGGTGTTAGTAGAAGAAATCAATATTGGGCTATGGATGCATGAATCGGAATCTGGGTTGGTAATGGCGAATGAGGTGGAGGAGCGAGTTAGAGAACTGATGGAATCGAAGAAAGGTGAGCTGGTAAGGAACCGAGTCATGGCTGTCAAAGCTGAAGCCAAGGCTGCGTTGCTTGAAGGTGGGTCTTCCTCCTTCGCATTGCGCAAACTCGTTCAGtcatggaagaaaaaata 1427 0.4821 MATKKEAIVLYPTAAIGHLVSMVELGKFILTHQPSLSIHILTTVAPYDAGSTARYISGVSGTVPSITFHSLPAVTLPPSIHSTANHETLTFEVLRLNNPNVHQALLSISKGYTIHALILDFFCSQAISVASQLNIPAYCYFTSGAASFAMFMYLPTIHNTTNKSFKELNTHLNFPGLPPMPSWDIPKPLLDRDDPAYKSFLNCSVLTPKTAGIIINTFEALEPTSLKALSDGSCIPDGTTPPVYCIGPLIAANNQTGGEHECLNWLDSQPSKSVVFLCFGSLGVFSKEQLKQIADGLERSGHRFLWVVRNPPSEESKNLADSSQNDPDLDSLLPEGFLARTKERGFVVKTWAPQVAVLNHEAVGGFVTHCGWNSTLEAVCGGVPMIAWPLYAEQRLNRVVLVEEINIGLWMHESESGLVMANEVEERVRELMESKKGELVRNRVMAVKAEAKAALLEGGSSSFALRKLVQSWKKK 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01201 475 Gene3D Glycogen Phosphorylase B; 260 456 - -
Bva04g01201 475 PANTHER GLYCOSYLTRANSFERASE 6 475 - -
Bva04g01201 475 CDD GT1_Gtf-like 8 456 IPR002213 GO:0008194
Bva04g01201 475 PANTHER UDP-GLYCOSYLTRANSFERASE 88A1-LIKE 6 475 - -
Bva04g01201 475 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 259 400 IPR002213 GO:0008194
Bva04g01201 475 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
Bva04g01201 475 Gene3D Glycogen Phosphorylase B; 8 461 - -
Bva04g01201 475 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01201 Bva-Chr4 8206823 8208432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01201 5 475 Glycosyltransferase AT3G16520 55.021 4.61e-169 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01201 - - qsu:111988381 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01201 04 8206823 8208432 Bva04g01201 04 8206823 8208432 ECH