Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01200 ATGGAAAAGAGAAGGTATACTCATCTCTATTTTGGAGTCATTAGACTGGTCCTGACCTTCAATGGGAAAGAGGGACTTCCTATAACTACAAAGGTTGCCCTTTTGGTCTCCAACTTTGTTCACTACGAGCATGCTGTGATTGTGACAATCCTCATCACCTTACAATGTAACACCCAGGTAGTGCCAGATCAAAACTATGATTTTGCAGACGGATCACTTAAGAGGGACGTTATAAATGGGAAAAAGCGTCGGGCTGACACTTACCATAGCTGGAGTTTAAAAGAGCAATCTTTGCAGTTAAAGGAAGTCCCTCTTCGCCATGGAAGCTTTGCCCCTCTTTCTTATCGATTACTGAATTCGGGTTCGATTGCTTACATCAAATGCAGATCTGATCACTCTTGGCTCCTTGCTTGCTTTTGCTTAACAGCAATCAGTATGCAATTCTTTGGAGGATCAGAAATCAGCCCATCACCACCTGTACCAACAGCGTCAGGAAATAATGCTCATATGATGTACGTGTTCAATAGAAACGGTGTGTGCTTGCTCTACAGGGAATGGAATCGCCCTCTTCGAACACTGAATGCTCAGCAAGACCACAAGTTAATGTTTGGTCTTCTTTTCTCCCTTAAGTCGTTAACTGCAAAGATGGATCCTACTAGTGCAGAGAAAGGAAACCTTGGGGTGCCTCAGTTACCTGGTCATGGTTGTTCCTTTCACAGTTTTCGCACTAACACGTACAAGCTCAGTTTCATGGAAACTCCTTCTGGAATAAAGATTATTTTGGTGACTCATCCTAGGACTGGTGATCTACGGGAATCTTTGAAGTACATCTACAACTTGTATGTTGAATATGTTGTGAAGAATCCACTCTATAGTCCAGGATCTCCAATTAGGTCTGAGCTATTCAATACAACGCTGGACCAGTATGTGAGAGGTATCTCATA 944 0.4269 MEKRRYTHLYFGVIRLVLTFNGKEGLPITTKVALLVSNFVHYEHAVIVTILITLQCNTQVVPDQNYDFADGSLKRDVINGKKRRADTYHSWSLKEQSLQLKEVPLRHGSFAPLSYRLLNSGSIAYIKCRSDHSWLLACFCLTAISMQFFGGSEISPSPPVPTASGNNAHMMYVFNRNGVCLLYREWNRPLRTLNAQQDHKLMFGLLFSLKSLTAKMDPTSAEKGNLGVPQLPGHGCSFHSFRTNTYKLSFMETPSGIKIILVTHPRTGDLRESLKYIYNLYVEYVVKNPLYSPGSPIRSELFNTTLDQYVRGIS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01200 314 Gene3D - 167 314 - -
Bva04g01200 314 SUPERFAMILY SNARE-like 169 312 IPR011012 -
Bva04g01200 314 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1-LIKE 146 313 - -
Bva04g01200 314 CDD TRAPPC1_MUM2 169 309 - -
Bva04g01200 314 SMART Sybindin_2 168 313 IPR007233 GO:0016192|GO:0030008
Bva04g01200 314 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 146 313 IPR007233 GO:0016192|GO:0030008
Bva04g01200 314 Pfam Sybindin-like family 169 311 IPR007233 GO:0016192|GO:0030008
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01200 Bva-Chr4 8192624 8204951 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01200 K20300 - csin:114295032 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01200 04 8192624 8204951 Bva04g01200 04 8192624 8204951 ECH