Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01194 ATGGGCTGGAAGAGTAAATCAAGAGCTAGGAGCTGCGGAAGAGAAGCAGGGCACTGTTTTGGGGTGAATTTCAAAGGAGCGAAGGACTGTTTCGATCGAGTAATAATAGAGTGCCAAATCGCATTTCTTGCTTGGGATATTCAGtctCTCACGATGCCTGTACTGAAAGACTCTCCACTTTTTGTTGCTAAAACATTTGAAGCTTTCAAAATTCCAACAAGCACAGGAAGGGCTGTGGTTTGTGCTGCAAAAGGTCCAAGACCTAGATATCCTCGAGTGTGGAAAACCAATAGAAGAATTGGGACCATTTCCAAGGCTGCAAAGCTGGTTAAGAATATTAAAGAACTGTCGAATGTCAAAGAGGAAGTTTATGGGGCTCTTGATTCCTTTGTTGCTTGGGAATTAGAGTTTCCTTTGATTACAGTAAAGAAGGCCCTGAAGACTCTTGAAGAACAACAGGAATGGAAGAGGATAATACAGGTAATAAAATGGATGCTAAGCAAAGGTCAAGGAAGGACAATGGGAAGCtatttcacattaattaatgCTTTAGCTGAGGATGACAGACTTAATGAAGCAGAAGAGCTTTGGACAAAGTTATTAATGCAAAACATGGAAGCCATGCCTCGTAAATTCTTTGATAAAATGATTTCTATATACTATAACAAGGGCCTGCATGAAAAGGTTCTTGAGGTATTTGCAGacatggaggaacttggtgtCTATCCAAGTATTTCGGTTGTTTCAACGGTCGGAGATGTCTTCCAGAAGCTGGGTATGCCAGACAAATACGACAAATTAAACGGAAAATATCCACCTCCTAAATggaaatttaaatacattagAGGAAAGCGTGTTAGGATCAGAGTAAAGCATCGAGATGATTCGGGTCAAGTCACGGAAGACATAGAAATGCATGAAGATGTGGCACAAAGACAAATTTCAAATGCAAACGAGGATGAGGGACATGAACATGCTTCTAATGTAATTAATGAGGCATTGGAACAGGATTTCATAGTCATAGACGAGGAACCTGAACAAACATCAGATGATTTATATGATGAGAAGAACGAATCAGCTGCCGGGCAAGTAGCAAATGAGAGAGCTGAGGACAAGACTGAGGGACATGAACATACTTCCATTGCAATTAACGAGTTATTCGAACGGGATTGCAATGTCATAGATTA 1187 0.3901 MGWKSKSRARSCGREAGHCFGVNFKGAKDCFDRVIIECQIAFLAWDIQSLTMPVLKDSPLFVAKTFEAFKIPTSTGRAVVCAAKGPRPRYPRVWKTNRRIGTISKAAKLVKNIKELSNVKEEVYGALDSFVAWELEFPLITVKKALKTLEEQQEWKRIIQVIKWMLSKGQGRTMGSYFTLINALAEDDRLNEAEELWTKLLMQNMEAMPRKFFDKMISIYYNKGLHEKVLEVFADMEELGVYPSISVVSTVGDVFQKLGMPDKYDKLNGKYPPPKWKFKYIRGKRVRIRVKHRDDSGQVTEDIEMHEDVAQRQISNANEDEGHEHASNVINEALEQDFIVIDEEPEQTSDDLYDEKNESAAGQVANERAEDKTEGHEHTSIAINELFERDCNVID 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01194 395 TIGRFAM PPR: pentatricopeptide repeat domain 215 244 IPR002885 -
Bva04g01194 395 PANTHER OS01G0757700 PROTEIN 55 333 IPR044646 -
Bva04g01194 395 Gene3D Tetratricopeptide repeat domain 104 267 IPR011990 GO:0005515
Bva04g01194 395 PANTHER OS01G0757700 PROTEIN 55 333 - -
Bva04g01194 395 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 209 243 IPR002885 -
Bva04g01194 395 MobiDBLite consensus disorder prediction 347 377 - -
Bva04g01194 395 Pfam PPR repeat 216 241 IPR002885 -
Bva04g01194 395 Pfam PPR repeat 179 201 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01194 Bva-Chr4 8146294 8153097 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01194 - - gmx:100809627 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01194 04 8146294 8153097 Bva04g01194 04 8146294 8153097 ECH