Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01177 ATGACGGAGGTTGTGCTGCATATTTATGATGTAACGAATAGTGGATCGGAGAAGACGAACAACACCATTGTTCAGATCAACAAGATCTTCAAGGACGGAATTGGTTTAGGTGGTATATTCCACAGCGCGGTTCAGGTATATGGTGATGATGAATGGTCATTTGGATTCTGTGAGCAAGGGACTGGAGTTTTCAGTTGCCCTTCAAGAAAGAATCCAATGTATACATATCGTGAATCCATGGTTCTAGGGACAAcaaacttttctattttcaaggTGAATCAAATATTAAGAGAACTCAGTAGAGAGTGGCCTGGTTGTGCTTATGACCTGTTATCCAAAAACTGTAACCACTTCTGTGATGAATTCTGTGAAAAGCTTGGGGTGCCAAAGCTTCCAGGTTGGGTTAATCGGTTTGCCAATGCTGGTGATACTGCTGTAGAGGTTTATGGAAATACAGCGTTACGGTTGCAGCAAGCCAAAACAGAGATTGTATCAGCAAGCAAAGTAGCGTACCGGTTCCTTTTGGGTGTCACGAATAATGTTAAAAGTGGTTCGGAGTCCCCAAGCAATTCAAACGGAGGATCCCCTCGATTTCAAGCTGCTTGGTTAAAAAATCTTGTTACTACTGGTGAAAAACCATCCAGTAGTTCAGAAATTGAAAACCAGGTTGAGGTACAACAACATCAAGAAGATGCCAAGACACCGCAACAACAGAGTTCAAGTTCACTTGATAGTTG 737 0.4125 MTEVVLHIYDVTNSGSEKTNNTIVQINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCEQGTGVFSCPSRKNPMYTYRESMVLGTTNFSIFKVNQILRELSREWPGCAYDLLSKNCNHFCDEFCEKLGVPKLPGWVNRFANAGDTAVEVYGNTALRLQQAKTEIVSASKVAYRFLLGVTNNVKSGSESPSNSNGGSPRFQAAWLKNLVTTGEKPSSSSEIENQVEVQQHQEDAKTPQQQSSSSLDS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01177 245 PANTHER DESUMOYLATING ISOPEPTIDASE 1 227 IPR008580 GO:0008233
Bva04g01177 245 SMART DUF862_2a 2 158 IPR008580 GO:0008233
Bva04g01177 245 PANTHER PPPDE PUTATIVE THIOL PEPTIDASE FAMILY PROTEIN-RELATED 1 227 - -
Bva04g01177 245 Pfam PPPDE putative peptidase domain 3 145 IPR008580 GO:0008233
Bva04g01177 245 MobiDBLite consensus disorder prediction 208 245 - -
Bva04g01177 245 Gene3D PPPDE domains 1 170 IPR042266 -
Bva04g01177 245 ProSiteProfiles PPPDE domain profile. 2 143 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01177 Bva-Chr4 8035407 8039071 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01177 - - cpap:110810316 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01177 04 8035407 8039071 Bva04g01177 04 8035407 8039071 ECH