Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01172 ATGGCTTCAGCTATTTCTACTTACACGGTGTTATGCCCATTATCTTCCTCGAGCTCAAGATTTGCGATTCGTTCAATATCTTGTACAATTTCACACTCTAAAATCTTGAATTTTCATCTCTCTCCATTGATATCTCCAATGGGTCGAGGTGTTTTCTCGGAATGGAATGGTCTAAAGCATATGGATACCTCAAGTAAACCAAAATCTCTTCATTTAGTCAGAAAAACCAAGTGTAAGGGAAAGGTGGTTTATGCATCTCTCTTTGGGGTTGGAGCACCTGAAGCCCTGGTAATCGGGGTTGTGGCTTTGTTGGTTTTTGGTCCTAAAGGTCTTGCTGAGGTTGCTCGAAATCTTGGAAAAACATTGAGGGAGTTTCAACCCACTATTAAAGAGCTTCAGGAAGTTTCAAGGGAATTTAAGAGTACACTTGAGCGGGAGATTGGTCTTGATGAGGTTTCGAGTACAACACCCAAAGCAAACAACTCCAATGTACCCAAGACTACCTCTACTCCAACGTCCACTGCAACTGTTGATAATTCTCAGACTACAATTGACCCGAATGGCACTGCAGATCCAAATAGAGCATACACCTCAGAGGAGTACCTTAAAATCAGAGAAGAGCAGCTAAAGGCATCTGCTGCACAACAGGAAGTGCAGGCACCACCTCCTGAAGAAGGACAATTAGAACCTGAAATCCAGCCTCATGCAAGCAAGGAAACAGCTGCTACTGTACCACCATCTCAGAAGCCTGAAAGTGAGACATA 764 0.4332 MASAISTYTVLCPLSSSSSRFAIRSISCTISHSKILNFHLSPLISPMGRGVFSEWNGLKHMDTSSKPKSLHLVRKTKCKGKVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLREFQPTIKELQEVSREFKSTLEREIGLDEVSSTTPKANNSNVPKTTSTPTSTATVDNSQTTIDPNGTADPNRAYTSEEYLKIREEQLKASAAQQEVQAPPPEEGQLEPEIQPHASKETAATVPPSQKPESET 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01172 254 MobiDBLite consensus disorder prediction 153 194 - -
Bva04g01172 254 Pfam mttA/Hcf106 family 90 140 IPR003369 GO:0015031
Bva04g01172 254 TIGRFAM tatAE: twin arginine-targeting protein translocase, TatA/E family 89 134 IPR006312 GO:0016021|GO:0043953
Bva04g01172 254 MobiDBLite consensus disorder prediction 240 254 - -
Bva04g01172 254 MobiDBLite consensus disorder prediction 148 254 - -
Bva04g01172 254 Gene3D - 87 135 - -
Bva04g01172 254 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATB, CHLOROPLASTIC 1 254 - -
Bva04g01172 254 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01172 Bva-Chr4 7963164 7967704 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01172 - - gmx:100781301 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01172 04 7963164 7967704 Bva04g01172 04 7963164 7967704 ECH