Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01168 ATGAGCGATAGAATCGATCGGCAGAGTGCGTTGGCGTTGACACACCCACCAATGAATTGGCCAACAATCTGTTTGCTTTTCGCGATCGTTTCtggtttttatttgattgagaGTTTCAGAAAGAGACGTAGTACGTGGCCGTTTAGCAGAAAAGGGCCCTCTGGGTTTTCGTCATCTTCCACTGCTGAGGAAGTTACTCGAGGGATCGATGGCACCGGTCTTACTGCCATTGTCACCGGAGCCTCTAGTGGTATTGGAGCTGAGACTGCTCGTGTTCTTGCTTTGCGTGGTGTCCATGTGATTATGGCTGCGAGAAGCTTGCAAGCTGCTGAAGATGTCAAAGAGGCAATAATTAAGGAGATACCCACTGCAAAGGTTGATGTCATGGAATTAGATCTCAGTTCAAAAGAATCTGTCCAGAAGTTTGCTTCAGAGTTTAATTCTTCTGGTCTTCCATTAAACATCCTGATGAAGAATACAAGTAGTGACTTGTCAGGTTTGAATGGAAGAAATAATGCAGGAATCCTGGGAACCCCTTTTATGCTTTCCAAAGACAATATTGAACTACAATTTGCTACAAATCACTTAGgtcattttcttttgacgaATCTTTTGTTGGATACAATGAAGAAAACAGCACATGAAAGtaaaaaggaaggaagaatTGTTAATGTCTCGTCGGAGTCTCACAACCGTTCGTATCGTGGAGGAATCCGTTTTGATAAAATCAATGATAAGTCAAGTTATAGCAGTTGGCCTGCATATGGACAATCAAAGCTTGCTAATGTTTTACATGCCAATGAACTTACAAGACGTCTCAAGGAGGATGGGGTGGATATCACTGCGAATTCTCTTCACCCAGGAGCAGTTGCTACCAATATTCTCCGTCATAACAATATCATTAATGGTGCAGTTAATATTCTTGGGAAATATGTGCTCAAAAGTGTCCAACAGGGAGCAGCAACAACATGCTATGTGGCCTTGCACCCACAAGTGAAGGGAGTTAGTGGTAAGTACTTTGAAAATAGCAATCTGTCCAAAGCATCCTCACAGGGAAGGAATGTTGAGTTGGCAAAGAAACTGTGGGATTTCAGCATGGATTTGACCAGATCGGTTGCTAGCTA 1124 0.4119 MGDRCCEEGVTPPMSDRIDRQSALALTHPPMNWPTICLLFAIVSGFYLIESFRKRRSTWPFSRKGPSGFSSSSTAEEVTRGIDGTGLTAIVTGASSGIGAETARVLALRGVHVIMAARSLQAAEDVKEAIIKEIPTAKVDVMELDLSSKESVQKFASEFNSSGLPLNILMKNTSSDLSGLNGRNNAGILGTPFMLSKDNIELQFATNHLGHFLLTNLLLDTMKKTAHESKKEGRIVNVSSESHNRSYRGGIRFDKINDKSSYSSWPAYGQSKLANVLHANELTRRLKVSCFSFAVMR 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01168 297 PANTHER RETINOL DEHYDROGENASE 59 289 - -
Bva04g01168 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 86 286 IPR036291 -
Bva04g01168 297 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 59 289 - -
Bva04g01168 297 Pfam short chain dehydrogenase 88 246 IPR002347 -
Bva04g01168 297 Gene3D - 82 296 - -
Bva04g01168 297 PRINTS Glucose/ribitol dehydrogenase family signature 88 105 IPR002347 -
Bva04g01168 297 PRINTS Glucose/ribitol dehydrogenase family signature 227 243 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01168 Bva-Chr4 7926236 7936857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01168 88 253 Acyl Lipid Metabolism Gene Families AT1G62610 29.379 2.27e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01168 - - tcc:18605593 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01168 04 7926236 7936857 Bva04g01168 04 7926236 7936857 ECH