Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01152 ATGATGCCTAAAGACTGGGATTCTCTCTGCGCACTTGGTCATAGAGCCAAGAACTGTCCTCAGGTGAAAGATAGCATGGAGGATTTCAAACATTGCTATAACTGTGGGGAAACTGGGCACTCACTAGTAAAATGTCCGCAGCCTCTTCAAGAAAGGGGGACAAAGTTTGCTGTTTGTTTTGTCTGTAATGAATATGGACACTTGAGCCAAAAGTGCCCTCAAAATACTCATGGCATTTATCCAAAGGGGGAAAAAGGGTCTGTTTCTGATAATGGACGTGTCAGCACAACATTTGGAACTGAAGAAAGGCCCAGCGGTTGGGTCACCAAATTATTAAGCGGGGATGATCTTCAGGATGACTTCATGACAGATGACATAAATAGTGGTGCGAGGGAGAAATCCACAAAGTCACAAGATGaTATCCTCTA 428 0.4393 MMPKDWDSLCALGHRAKNCPQVKDSMEDFKHCYNCGETGHSLVKCPQPLQERGTKFAVCFVCNEYGHLSQKCPQNTHGIYPKGEKGSVSDNGRVSTTFGTEERPSGWVTKLLSGDDLQDDFMTDDINSGAREKSTKSQDDIL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01152 142 ProSiteProfiles Zinc finger CCHC-type profile. 59 74 IPR001878 GO:0003676|GO:0008270
Bva04g01152 142 Gene3D - 54 86 - -
Bva04g01152 142 ProSiteProfiles Zinc finger CCHC-type profile. 32 47 IPR001878 GO:0003676|GO:0008270
Bva04g01152 142 SUPERFAMILY Retrovirus zinc finger-like domains 28 76 IPR036875 GO:0003676|GO:0008270
Bva04g01152 142 PANTHER OS04G0555800 PROTEIN 12 135 - -
Bva04g01152 142 MobiDBLite consensus disorder prediction 125 142 - -
Bva04g01152 142 Pfam Zinc knuckle 31 47 IPR001878 GO:0003676|GO:0008270
Bva04g01152 142 Pfam Zinc knuckle 58 74 IPR001878 GO:0003676|GO:0008270
Bva04g01152 142 SMART c2hcfinal6 9 21 IPR001878 GO:0003676|GO:0008270
Bva04g01152 142 SMART c2hcfinal6 31 47 IPR001878 GO:0003676|GO:0008270
Bva04g01152 142 SMART c2hcfinal6 58 74 IPR001878 GO:0003676|GO:0008270
Bva04g01152 142 Gene3D - 10 53 - -
Bva04g01152 142 MobiDBLite consensus disorder prediction 79 101 - -
Bva04g01152 142 MobiDBLite consensus disorder prediction 121 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01152 Bva-Chr4 7756268 7760835 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01152 - - gmx:121174300 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01152 04 7756268 7760835 Bva04g01152 04 7756268 7760835 ECH