Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01143 ATGGATTCTGGATTAGTTCATAGCCGTGTGGACGGCGAGTACGGCCAAGATCATCAACCCCAGAACGCTGGCTTACAGCATGGTGGAGATGAACACCACCATGACATCAAGTCGGTTCTGAAGAAGGCTAAGGCCAAGGCTAAGAAAATCAAGAACACTATCACCAAGAACAGGCATGGTCATGACCAAGATCATGATCATGGGTACCATGATGAAGGTCAACATGTCCCAGATGATCATGTCTCGTACGATGAAGATGACGAGGATGAAGGAACAGTTGAAAACCCAGAAGTTCATGGAGCACCAGTTTACGAAAGTGCAGCCATTGAGAATTTGGGTCATCCCGGAGTTAACGTCGGAGGAACAACGGCGACCGGAGAAGAACATCATAAGGAACCTCGAACTGCGGTTGTTTCTTCAAGTGCCGAAAGTAACCTAAACGGGGTTACTGAACCTGCCGGAACATTTGTCCGCGAAGATAATACAAGGCAACTTGCAGAGGTGAATTTGGATAGGCCAATGGGGTTAGACGAACACCCTTATCAGAGCAAAGTCACTGATCCAACTGGGGCAGGtgataaagaattatataCTACCCCAGTTGAAGACTCTCTGGCGAGAATGAACATCGACAATGAGCCAAAACCAAACACGGTCTTGCCAATTGGTTCTGGAATTCAGTACCCGTCCGCCGGAAGACATGACGAACTCTCTCCGGAGCCCACTCCCACTCCCACAAACTCATTTAAATTCCCTGAATATCCCCAAGAAACTGGGAAAATATCTGATACAGTGATTGAACCTGAAGAACATCCACGCTCTGAGACAACAGAGAAACCCGAATTTCCCCAAGAAATAGCAAAAACATTTGACGCCATGACTCAACCTGAGGAATATCCACACCATGAGACATTAGAGAAGCCCTCAACCCAGAGCAGCTACACAGAAAAAGTCCCTTCTGCAGCCTCGGAAATCGCTGATGAGGGTACCTCTGCGGAAAATGTTGCTGCTTCCAAGCTTGGATATGGAGAGAAGGGTAATAGAGACAAGAACGAAATGAAACAAGAAGAGAAACCATCGAACCAGAGCAGTTACACTGAGAAAATGTCGTCAGCTACTTCTGCCATTGCTGATAAAGTTATCTCTGCTAAGAATATTGTAGCTTCCAAGCTCGGTTATGGCGAGAAAGACGACAGAGAGAACAAGGAGAACGAAATGAAACATGAAGAGCGAAACATTGAACCATCAAACCAGGGCAGTTACACAGAGAAAATATCGTCCGCAACCTCTGCAATCGCTGACAAAGCAATCTCTGCTAAGAATGTTGTAACTTCCAAGCTGCTTTATGGCGAGAAAGGTGACAGAGACAACAAGGAGACAACCCATGTAAAGAATGAAAGTGGGGATGCTGCTACAAAGCCAGAATCCACTCTGGAATATGGGAAGAAAATTGCTTCCACCGTAACAGAGAAACTAACCCCGGTTTATGGTGCAGTTGCAGGGGTAGGAAGTGCAGTAATGTCAAAAATGCCCGGCACCGGCACCGGAACCGAAACTCGTACTGATAGTGGGAGTGAAGAGAACGAGATTCCAAAGCAGGACAAAGGGGTTTCAGTGAAGGACTATTTGGCTGAGAAGTTGAGGCCCGGCGATGAAGACAGGGCTCTGTCTGAGGTAATTTCAGAGGCTTATCATAAGCGAAAGAAAGATCCAATGGAGGGTCTCGGCCATGAAAATAGGGCAAAAACAGAGCAGGATCGACCATTGGGGAAGGTGACAGAGTCAGAGGAGGTAAAGAGGCACCTGGGCATTGACAAGGATGAAAAGGGAAGTGAAGAGAGCCATGTGAATAGCCCCGGCAAGGGTGTGGTTGAAAAGCTAAAGGGTGCGGTTGGTTCCTGGTTTGGGAAAACAGAAGCGCCTCCGTCTTCAGAAGTTGCAGATGAGAGAAAGCTTCACGAGTCAAATTG 1970 0.4695 MDSGLVHSRVDGEYGQDHQPQNAGLQHGGDEHHHDIKSVLKKAKAKAKKIKNTITKNRHGHDQDHDHGYHDEGQHVPDDHVSYDEDDEDEGTVENPEVHGAPVYESAAIENLGHPGVNVGGTTATGEEHHKEPRTAVVSSSAESNLNGVTEPAGTFVREDNTRQLAEVNLDRPMGLDEHPYQSKVTDPTGAGDKELYTTPVEDSLARMNIDNEPKPNTVLPIGSGIQYPSAGRHDELSPEPTPTPTNSFKFPEYPQETGKISDTVIEPEEHPRSETTEKPEFPQEIAKTFDAMTQPEEYPHHETLEKPSTQSSYTEKVPSAASEIADEGTSAENVAASKLGYGEKGNRDKNEMKQEEKPSNQSSYTEKMSSATSAIADKVISAKNIVASKLGYGEKDDRENKENEMKHEERNIEPSNQGSYTEKISSATSAIADKAISAKNVVTSKLLYGEKGDRDNKETTHVKNESGDAATKPESTLEYGKKIASTVTEKLTPVYGAVAGVGSAVMSKMPGTGTGTETRTDSGSEENEIPKQDKGVSVKDYLAEKLRPGDEDRALSEVISEAYHKRKKDPMEGLGHENRAKTEQDRPLGKVTESEEVKRHLGIDKDEKGSEESHVNSPGKGVVEKLKGAVGSWFGKTEAPPSSEVADERKLHESN 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01143 656 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 358 IPR037491 GO:0009737
Bva04g01143 656 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 351 415 IPR037491 GO:0009737
Bva04g01143 656 MobiDBLite consensus disorder prediction 137 151 - -
Bva04g01143 656 MobiDBLite consensus disorder prediction 562 656 - -
Bva04g01143 656 MobiDBLite consensus disorder prediction 263 285 - -
Bva04g01143 656 MobiDBLite consensus disorder prediction 343 357 - -
Bva04g01143 656 MobiDBLite consensus disorder prediction 39 55 - -
Bva04g01143 656 MobiDBLite consensus disorder prediction 506 540 - -
Bva04g01143 656 MobiDBLite consensus disorder prediction 451 478 - -
Bva04g01143 656 MobiDBLite consensus disorder prediction 1 371 - -
Bva04g01143 656 MobiDBLite consensus disorder prediction 391 414 - -
Bva04g01143 656 MobiDBLite consensus disorder prediction 451 469 - -
Bva04g01143 656 Pfam Protein of unknown function (DUF2800) 314 385 IPR021229 -
Bva04g01143 656 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 403 645 - -
Bva04g01143 656 MobiDBLite consensus disorder prediction 389 425 - -
Bva04g01143 656 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 403 645 IPR037491 GO:0009737
Bva04g01143 656 MobiDBLite consensus disorder prediction 562 615 - -
Bva04g01143 656 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 351 415 - -
Bva04g01143 656 MobiDBLite consensus disorder prediction 56 81 - -
Bva04g01143 656 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 358 - -
Bva04g01143 656 MobiDBLite consensus disorder prediction 522 540 - -
Bva04g01143 656 Pfam CAP160 repeat 320 343 IPR012418 -
Bva04g01143 656 Pfam CAP160 repeat 425 450 IPR012418 -
Bva04g01143 656 Pfam CAP160 repeat 370 394 IPR012418 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01143 Bva-Chr4 7688189 7691039 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01143 - - ahf:112802849 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01143 04 7688189 7691039 Bva04g01143 04 7688189 7691039 ECH