Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01142 ATGCGAACTCGCTTCCTCAACATCGATTACTTCAGCCTCGCTCCACCCCAGTCCAGAGAAACCCTAGCCTTCCTCCAACTTCCGGTTCATCGcctcccttcttcttctcttccatcCGCCATTGAAGATCACCTTAAATTTGATTCTCTCCTCGATGTTCCTATTCTTATCGAGAGTTTGCCTATCAATGATGCTCTGTCCAAGTTCCTCTCCGACGTGCTTCCTCACAACTTTCatgttgattttgaagatttcGATGCTGCCAGTGCTTCTCGGGATAGAAAATGCTTCCGATCCTTCAGCATTGGAAGTGTTGGAAATCGAATTTCGGAATGGCTTGGTATGAGAAAGGCTAAGATAATTCAAGAAGCAGTGGTTGTTTTTGAAGATAATGAAGTGGACAAACACCAAATTTCGAGCTCTGAAGCTGAAACCGAATCGTTAAATGAGGGTGAAGGGAGTGCTCTTAGTGATAAGAATGAAAGTGTAGATAGAATTATCCAATTCGAAGCACCTGAGCTTGATGTACTCTtgGAAAGTACTTGGTTCCCTGAGGAGGACACAAAGCAAATACTGTCTGAATCTGAAACTCCAGGGTTCGAAGTTAATCTGAAAATGCTCAAGCCTGAGTTCTCGATGCATTACACCTGTGAGCTTCTGGAGTCAATATTTTCAGTTGAAGTCACTCCAGTGTGCTATGCAGTGACAGATGGTTACTGTTTAGAAGATAATATTCCTGTCCAGAAGCTACAACACACTATCCATGGGAAATTTCCTATCCTAGAAGTGGATGAGGATGGTTTGGGAATTTTGACATGCTTAGCtatgaagaaaaatgtcaattCACTTTTTGATGATATAAGGCCTCAAAACTTGGATACCAAATATCACTTTCCCATTGAGGGTCAGGAACTTATGGGTTCTGTGAAGTATAATATAATGGACTACTTTTCAGTTGACTGTTTGTCAAAGCAGAGCCTggtattatcatatatatttcctGAAAGGgagtttataattatgttgGAAACCAAACACGATCGGGAGAATTCTGCCGTGCAAGGGGCATCGCGGGCTGATAATCCCTTGATAGTGAATCAAGTTACCTTTGAGGAATTCATGTTCCTTGAAGAGGACTTATTTCAAAGCTTTGAAGTCTTCTATAACATGCAAACATTAGATTATCCGGGAACAAGTGAGTGGATGTTGAAGAAGGAGTTCAACTTCaagaattttgatgaattgGTTGTTCGTAGTGAGATGGCATTAATAGACGACAAATTTAAATCGCTGCCCATACCTGTTATCTCTGATGATGAAAAGATGATGTCCGTGAATGTAATAATTGGAGAAATGTTTCACAACTTGAAGACTCATCCCCTACCTGCATCTGATGGAATATACATGAACTGGGATTTACTGGAAGAAGATAAATGCAATTCCCAATTTTATCATTGCTGTCAGAATTTATGGGCCAAGATAGATCTGAAAGACATAGGTTTCGATGGACACTCTCTGGATGATGGAAGAATGGTGTTTGATCTTGTTTCCTCTAGTGATGCTATAAGTGAATGtggaaaaaaaagtgaagaattACAGAAGTTGCTTTTCTATAGCCCTTCTCTGCTTGACGATCATATAATAGGAGCTAATTTAAGCAAACCATTGGATGACGGGTCTCCTAGACAAGGAAATGGAGTACAATTAGCTGAAAGAAATGCTGAGAGGGCTTTTTTGTTATTCAAGTCCATGCAAGATGTCAGCAATCTAGATTATTTCTTAAACCCTCAGAAAGCAACTTTTAAGGGGCATTGTAACTTCCCAGTTGAATCAACTGATGCTAATATTAAAGTTCCAGGCTCTGCTTTGCAAAGTCATCATAGTCATCAGAATATGGAATCATTCCCTGATGCAGTTATTGTCGTGAATACTCAAAGTATAGATAAGGAAATGATAATGTCTAGAAGAAGCACGTACCAAATAATTCTTGCAATGGAGAAAGAAGGAACACAAGTTGTTGAACGTGATCTGGATTTGCCTGTGGATATTATAATCAATTCAGCGATTTGCTTGGTGTGGTATGATGACAGAAACCTGGGGAAGAAAGCAACTCAACTGATTGAAGTTTCTTCAAGCTTGCCTTTATGTATCGAGGATATTGCAACAAATGATTTGACATTGTTGAGTTTTTCCTTCAGTGGCTGCTTTCTGGTCTTTGAGGGAGATGTTAACTTCATTTCAACTGTAATGGAATCCTCAGATGGACTTTATGCTGCTGGAGCAAGCCTGGGAATTGATTTGCAgatattcttttcttactCATCCGAgttaacaaatgaaataatagtGAGCTGCATCAATTATGGTACCAAACTGACAAGGGGCCTGTATCCTAGAATGCCTGATTCAGTAACTATTGCAGAGTCATTTCTTACGGCATTTCCTTCAATAAATCCTTTGATAGCACATGCTATACTGTCTTCAGCAACCGTGCTCTGTGAATTTCTCGAGTGGTCAAATGAACAAAGGGTACGTGTCTTAGAAAAGTATAATGTCCCTGAACCCAGTATTGCTCTATTTAGTGCTCTCTGCAAATACGGGGAGCGGGAGGATTCAAAATCCATATTGACAGACTGCTCATCTTCGGTATCTTCTGGCCCAGACTCATACAGATGTCAAGTtgattatgaaagaaaaagaacaaggaAAATAAGTAGTCCCCAGGAAGATGAACTATGTTTTGATGAACCATTACAATTTGAGCCATTAGACCAATCGTTTAATGGTGACTTGGATTCTTCTACCCTGTCAAAGCATTGTCATGCTGGCATGTCAAAAGATACGGGGAGATTTAGAGACTTAACAAAGACTAGTTTGTCCACGAACGATTTATTTTGCCAAAAGCAAGGATTCGATGTGACCACAATCGGAACCCCTTCAGTCTCCCGGCCATCATATGATTCACGGAACTTAAAAGTTCCCGAAATATTGGAGCAGAAAAACAAGAcctcttcattttttgaagataAAGCGTTGGCTCCAAATGACATCCTGAATACTGATATAATCAGCAAAAATCTTACTTGGCATGGCCTTAGTAATCCTAAGAAGGCGCATAAGGACAGTACAGGCAAGTTTACTGATTTAACTGGTACTCCTGTACAAGATAAAAACTTCTCCTTCATGGATGACTCCATGGATTTTCTAGGTTTGTCGACTGAGACAGACGAGGACCacagaagaaagaataaaattactagAAGATCGTCTTTTGATAAGGGCAGTCACCTTGAGGTCAACACTTCAAATATCTCGAGTTCTTTAAAAGATGCAGGAATGGAAGTTGGAAAGTATCCAGAACCGTATTTTTTAAGGGATGACTTGCCTCATGATGATGTAAGGCACAGTGAAAAAATTTCTGACGAGGGATTAACTCGGGCGTCTATGAGAAACATGCAAGGATTACCCATCCAAGAGATGTCACATTTGGGTGGAACTCCACTTTCACGTGCTCTCAGGTCAGCTagtccattaaaaaaatcaccatGGACAATAGGATTTcttaatagaataaaagaaaagagcaaaTTACGTCAAAAATCATTATCATGCAAGAACGATGTTCCCTGTTTTGGTGACTCGGGGAATATGTGTAGAGTTCCTAAGAGAAAAAGTCCTTCTATTATTGAATTCTTCAAGTACCAAGGAAGCAGGCCTCATGGAAATATACAAGAACAGAAAAGGCAGAAACAATCTGCGCAATCGTCAAAGCCagttaaaaatggaaaatgttCAGACTCTCTGCCTGCCAAATGGACACCAAATGATAAAAAAGCATGGAAGACGCTGACTATTGCAATGAAAGAAAGGCGAAGCCAAACTATACTTGTTTGGAGTGATGGAACTGGAGGTTCGACAAAGAAGTTACGGTATCAGACGCAACAATCCATCTA 3953 0.3767 QEAVVVFEDNEVDKHQISSSEAETESLNEGEGSALSDKNESVDRIIQFEAPELDVLLESTWFPEEDTKQILSESETPGFEVNLKMLKPEFSMHYTCELLESIFSVEVTPVCYAVTDGYCLEDNIPVQKLQHTIHGKFPILEVDEDGLGILTCLAMKKNVNSLFDDIRPQNLDTKYHFPIEGQELMGSVKYNIMDYFSVDCLSKQSLVLSYIFPEREFIIMLETKHDRENSAVQGASRADNPLIVNQVTFEEFMFLEEDLFQSFEVFYNMQTLDYPGTSEWMLKKEFNFKNFDELVVRSEMALIDDKFKSLPIPVISDDEKMMSVNVIIGEMFHNLKTHPLPASDGIYMNWDLLEEDKCNSQFYHCCQNLWAKIDLKDIGFDGHSLDDGRMVFDLVSSSDAISECGKKSEELQKLLFYSPSLLDDHIIGANLSKPLDDGSPRQGNGVQLAERNAERAFLLFKSMQDVSNLDYFLNPQKATFKGHCNFPVESTDANIKVPGSALQSHHSHQNMESFPDAVIVVNTQSIDKEMIMSRRSTYQIILAMEKEGTQVVERDLDLPVDIIINSAICLVWYDDRNLGKKATQLIEVSSSLPLCIEDIATNDLTLLSFSFSGCFLVFEGDVNFISTVMESSDGLYAAGASLGIDLQIFFSYSSELTNEIIVSCINYGTKLTRGLYPRMPDSVTIAESFLTAFPSINPLIAHAILSSATVLCEFLEWSNEQRVRVLEKYNVPEPSIALFSALCKYGEREDSKSILTDCSSSVSSGPDSYRCQVDYERKRTRKISSPQEDELCFDEPLQFEPLDQSFNGDLDSSTLSKHCHAGMSKDTGRFRDLTKTSLSTNDLFCQKQGFDVTTIGTPSVSRPSYDSRNLKVPEILEQKNKTSSFFEDKALAPNDILNTDIISKNLTWHGLSNPKKAHKDSTGKFTDLTGTPVQDKNFSFMDDSMDFLGLSTETDEDHRRKNKITRRSSFDKGSHLEVNTSNISSSLKDAGMEVGKYPEPYFLRDDLPHDDVRHSEKISDEGLTRASMRNMQGLPIQEMSHLGGTPLSRALRSASPLKKSPWTIGFLNRIKEKSKLRQKSLSCKNDVPCFGDSGNMCRVPKRKSPSIIEFFKYQGSRPHGNIQEQKRQKQSAQSSKPVKNGKCSDSLPAKWTPNDKKAWKTLTIAMKERRSQTILVWSDGTGGSTKKLRYQTQQSI 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01142 1196 MobiDBLite consensus disorder prediction 1118 1141 - -
Bva04g01142 1196 MobiDBLite consensus disorder prediction 1 38 - -
Bva04g01142 1196 MobiDBLite consensus disorder prediction 21 35 - -
Bva04g01142 1196 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 16 502 - -
Bva04g01142 1196 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 501 1185 - -
Bva04g01142 1196 MobiDBLite consensus disorder prediction 1118 1151 - -
Bva04g01142 1196 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 16 502 IPR038824 GO:0007131
Bva04g01142 1196 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 501 1185 IPR038824 GO:0007131
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01142 Bva-Chr4 7679597 7686103 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01142 - - adu:107490869 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01142 04 7679597 7686103 Bva04g01142 04 7679597 7686103 ECH