Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01121 ATGCGGATCTTGTTCAGCTATACAGCCAGTATATTGAAGCGCAAGACTTTAACGCTTCATCGTAATCAGTTAATTCTCTACAATGTCAATTTCACGAGAGAAATGTCTCAATCCACTGCCATTCCCAAAAAGCTTCAAAGAGTTCGAGATCATGGCTACGACAATTACATGGAGGTCGAGAAGAAAATGCGCAAAGTTCTCAAGTTTCAGGACCTTCTTCTCTCTCAGCACAATCAAACAATCCTAATTCCTCGCCTTGACACCCTCGCTCGCCGCCTTGGTTTCAAGCAGCACGAAGCTGGCGCTTTCATCCTCAAATTCCCTCATGTTTTCGAGGTTTATGAACACCCAGTTCAGCGGATTCTCTATTGCCGCTTGACCCGGATGGCCAATCTCCAAATTGAGCAGGAGAGGAATGCCCTCATTGCACAAGTCCCAGAAGCCGTGACGCGCCTTAGGAAGCTTCTCATGATGTCTAACACTGGAAGGCTTCGTCTTGAGCATGTTCGGATTGCACGGTCTGCGTTTGGATTGCCTGACGACTTTGAATATTCGGTGATTCTCAAATACCCTCAGTATTTTCGATTGTTTGATGCTAAAGAAACTAGGAATAAGTACATTGAGCTAGTGGAGAGAGACGAAAGCTTAGCTGTGTGTGCAATAGAGAAAGCAAGGGAGAAGGAGCATAGGGAGAAAGGAATTGATGCAGAAAAtgttagattttcttttcttgtaaaTTTCCCTCCTGGGTTTAAGATTGGTAAGTACTATAGAATTGCTGTGTGGAAGTGGCAGCGGCTTCCTTACTGGTCACCTTATGAAGATGTTTCCGGGTATGATTTGCGATCAATTGAGGCTAAGAAGCGAATGGAGAAGAGGGCGGTTGCCACAATCCATGAATTGCTGTCTCTGACAGTGGAGAAGAAAATTACTTTAGAGAGGATTGCACATTTTCGGATGGCAATGGATTTGCCTAAGAAGTTGAAAGACTTTCTTCTTCAGCATCAAGGGATATTTTATATCTCCACCAGAGGAAATCATGGAAAACTCCATACCGTTTTCCTTAGGGAGGCATATAAAAAGGGAGAGTTGATAGTGCCTAATGATTTATATTTGGCAAGAAGGAAGCTAGCTGAATTGGTTTTATTGAGTCCTAGGAAAGCAAAAGTCGACAGAGAATTGGTTGGCTACAGGAGAAGCAGGGTAGATGATGACATGTTGCTTATGGCAGGAGCTCATGTTGAGAATGACTTTCAAGACTTACAGGGTGGAAATGGTACAGTGCAGGATAGGGATTCACAAGATGATTTGACATCAGATTTGAGTTCCGACGTTGATTCTGATTTTGTAGATGAGGATTG 1361 0.4291 MRILFSYTASILKRKTLTLHRNQLILYNVNFTREMSQSTAIPKKLQRVRDHGYDNYMEVEKKMRKVLKFQDLLLSQHNQTILIPRLDTLARRLGFKQHEAGAFILKFPHVFEVYEHPVQRILYCRLTRMANLQIEQERNALIAQVPEAVTRLRKLLMMSNTGRLRLEHVRIARSAFGLPDDFEYSVILKYPQYFRLFDAKETRNKYIELVERDESLAVCAIEKAREKEHREKGIDAENVRFSFLVNFPPGFKIGKYYRIAVWKWQRLPYWSPYEDVSGYDLRSIEAKKRMEKRAVATIHELLSLTVEKKITLERIAHFRMAMDLPKKLKDFLLQHQGIFYISTRGNHGKLHTVFLREAYKKGELIVPNDLYLARRKLAELVLLSPRKAKVDRELVGYRRSRVDDDMLLMAGAHVENDFQDLQGGNGTVQDRDSQDDLTSDLSSDVDSDFVDED 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01121 453 Pfam Plant organelle RNA recognition domain 48 384 IPR021099 GO:0003723
Bva04g01121 453 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 22 442 IPR045040 GO:0003723
Bva04g01121 453 PANTHER PROTEIN ROOT PRIMORDIUM DEFECTIVE 1 22 442 IPR040295 -
Bva04g01121 453 MobiDBLite consensus disorder prediction 439 453 - -
Bva04g01121 453 MobiDBLite consensus disorder prediction 418 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01121 Bva-Chr4 7547061 7549042 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01121 - - qsu:111997717 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01121 04 7547061 7549042 Bva04g01121 04 7547061 7549042 ECH