Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01112 ATGGGTGCTGCTATTTCTTCAAGTACAACAGAAGATCATAATAATGGGGGATCCGTTCCTGGTCTTGATGATATCCCAGAAAGTTGCATATCTTCCCTGCTCATGAATTTTGACCCGCCAGATATCTGTAAACTGGCCACAGTGAACAGGGCCTTCTACAGAGCTTCTTCTGCTGACTTTCTATGGGAATCAAAGCTACCCTCAAGCTATAAGTTTCTCGTTGACAAAGTTCTTGCTCAGGAAAATCTCCATAACTTGTCAAAGAAACAGATTTATGCAAAACTATGTCGACCCAATAGATTCGATGGTGGTACCAAAGAAGCTTGGTTGGATAAATGTAGTGGGCAAGTTTGCTTTCTCATGTCATCAAAGTCCTTAAAGATTACAGGAATAGATGACAGAAGATATTGGAACTTCATCCCAACTGAGGAATCCAGGTTCCAAAACATTGCATATCTTCAACAAATGTGGTGGGTTGAAGTGCTAGGTGAGAATTCCTCTCTCTTGTTATGCGGATCCGTACGCAGTGCCAGTCGGTACCGTCCATACATACTCTCTAATCTACCCTTCTGGATTCGGCTGCTTTTCTCTAGATCGATACACCCTTTGGTGAAACAGCGAAAGGCTGTTATAATTGGGAATATGTCTGAAGTGGAAAACAAAGTGGATTTCATCCAATGGCTCGAACCTGACATGTCATTTATGATTATCAGccagttggatgatccttgtGACCTTGTCCGTGTTTCTACTGTTTCAAGTTCTTGGCACCGATTTGTTATTGAAAATGGCCTTTGCAAGCAGCTTTGCTTGAAAATGTTTCCTGAATTCTCTGGTGTTGTTCATGTTGTTGAGGAAGAAAACATGATAGAACCAGTAAGTGACACGATCAGCAATGCTCAAGATTTTGAATGCCTTAAGAGAAACCATAAAGTCTATGCCTTCCTAGCACATGGTCTTCCTAAATTTATGACGAAAGATTGCATTTCAGAAGCCATCAGTGCATCCAGCACTGATAACTACCCTGAAGAAAGCATTCAGAATACATTGGATCCAAGGGATATAACTGAACATAGGGCGTCATACTGGTCAAGTCAAGGGGAAAGTGATCCTTCTGTTCCTGAGACATTAGTTTATAAGCTGGCTGCCACAATATGTGTTGTTACCGAGATCAATGTCCGGCCCTTCCAAGCATATTTTCAGCATGGCTTCCCAATATATTCAGCTAGCGCTGTCCGATTCAGAATGGGTCATCCAAGATATCCAGTGGAATTAGAGAGTCCAGTAGCAGATATCACTAGTGCTCATTCCGAGTTTGGGGATAATGATTACATATGGACATATATTTCACCTGAATTTCCAATGGCCCACGAAAACCGCTTGCAAAAATTCAAGCTACCTGAACCTGTTCTATGCATTGGAGGAGTGCTTCTAGTTGAGCTGCTGGGTCGCGTTCAGAAACAAGAAATGGATCAGTTATTCTACATATGCATCTCCCATGTTCAAGTCGTGGGACGACCACTCTCACCAGATTTTGATGTTACAATGCATCATCCATTAGGAAAGTGCACCTTGAAGTACTGCCCTCAAACAGACTGCTGCTCATCTTCTACATCATCAAGCGGAGACTCGATCCAACATTCTCGTTTGCGTGCATTCACCGCCGGCATAATGCAGAGGGGCGTCAGACGTTGGGAGCAAATGATCTTAGCAGCACTACTTGGTTCTGGGACCGGTGTAATTGATGATAATGAACAGAATGAATG 1766 0.423 MGAAISSSTTEDHNNGGSVPGLDDIPESCISSLLMNFDPPDICKLATVNRAFYRASSADFLWESKLPSSYKFLVDKVLAQENLHNLSKKQIYAKLCRPNRFDGGTKEAWLDKCSGQVCFLMSSKSLKITGIDDRRYWNFIPTEESRFQNIAYLQQMWWVEVLGENSSLLLCGSVRSASRYRPYILSNLPFWIRLLFSRSIHPLVKQRKAVIIGNMSEVENKVDFIQWLEPDMSFMIISQLDDPCDLVRVSTVSSSWHRFVIENGLCKQLCLKMFPEFSGVVHVVEEENMIEPVSDTISNAQDFECLKRNHKVYAFLAHGLPKFMTKDCISEAISASSTDNYPEESIQNTLDPRDITEHRASYWSSQGESDPSVPETLVYKLAATICVVTEINVRPFQAYFQHGFPIYSASAVRFRMGHPRYPVELESPVADITSAHSEFGDNDYIWTYISPEFPMAHENRLQKFKLPEPVLCIGGVLLVELLGRVQKQEMDQLFYICISHVQVVGRPLSPDFDVTMHHPLGKCTLKYCPQTDCCSSSTSSSGDSIQHSRLRAFTAGIMQRGVRRWEQMILAALLGSGTGVIDDNEQNE 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01112 588 MobiDBLite consensus disorder prediction 1 20 - -
Bva04g01112 588 SMART fbox_2 228 269 IPR001810 GO:0005515
Bva04g01112 588 SMART fbox_2 25 64 IPR001810 GO:0005515
Bva04g01112 588 Pfam Phloem protein 2 117 169 IPR025886 -
Bva04g01112 588 MobiDBLite consensus disorder prediction 1 16 - -
Bva04g01112 588 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 219 586 - -
Bva04g01112 588 ProSiteProfiles F-box domain profile. 19 65 IPR001810 GO:0005515
Bva04g01112 588 SUPERFAMILY F-box domain 216 285 IPR036047 GO:0005515
Bva04g01112 588 Gene3D - 210 314 - -
Bva04g01112 588 SUPERFAMILY F-box domain 11 97 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01112 Bva-Chr4 7487236 7495833 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01112 - - gmx:100786763 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01112 04 7487236 7495833 Bva04g01112 04 7487236 7495833 ECH