Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01094 ATGAAATCGTCTATGGGTATGGCGGATTCAGCTTCGTGGTACTGTGCGACGGCGTTATTAGCGCTGATATTGTTGGGTTCGATAAGGGAGAGCTCTCTGGCTGATAATAAGCCTGAAGCAGCTTTCAGAGGGAACCAGTTGCTGGATCGTCCCTGCGACGAGATATACGTCGTCGGAGAAGGCGAGACCCTTCACACCATCAGCGACAAGTGCGGCGACCCATTTATCGTGGAGAGGAACCCGCATATCCATGACCCGGATGATGTCTTCCCGGGTCTTGTCATTAAAATCATCTCCTCCAACACTAGGAGGTA 314 0.5159 MKSSMGMADSASWYCATALLALILLGSIRESSLADNKPEAAFRGNQLLDRPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKIISSNTRR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01094 104 Pfam LysM domain 56 97 IPR018392 -
Bva04g01094 104 Gene3D LysM domain 48 103 IPR036779 -
Bva04g01094 104 PANTHER LYSM DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 2 103 - -
Bva04g01094 104 CDD LysM 55 97 IPR018392 -
Bva04g01094 104 PANTHER EMBRYO SAC 1 2 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01094 Bva-Chr4 7285214 7285849 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01094 - - zju:107414412 163.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01094 04 7285214 7285849 Bva04g01094 04 7285214 7285849 ECH