Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01093 ATGGGTTGGGGATTGAAGCAATTTTTTTGGGCTTTTCTTGTTGCAGTTGTATTATTCTTCAATGGCTTATCTTATTCTGAAAAGGCTCCAGCTTACACATTTGTGAAAGAAGCAACTTCTGCACCATTAGTCTCATTCTATGATTACATTATCATTGGTGGAGGAACATGTGGGTGTCCATTGGCTGCAACTCTCTCACAAGGTGCAAGAGTTCTAGTGCTAGAGAGGGGAGGCTCACCCTACAAAAACCCAGACCAGATCAACATAAACAACTTTGTCAATACCCTCTCTGACACATCTCCAACATCATTTTCCCAACCTTTCATATCCAGAGATGGAGTCCTCAACACCCGGGCACGTGTTCTAGGCGGTGGCTCTGTCTTGAATGCCGGATTTTACACACGGGCTAGCAGCAAATACATAAGGGATGCAGGTTGGAATCAAACATTGGCAAGGGAATCATATCAGTGGGTTGAAAAGTTGATGACTTTTGAGCCTGCAATGTTACAGTGGCAATCAGCAGTAAGAAATGGGCTTCTGGAAGTCGGGGTCTTGCCTTACCATGGTTTTACTTTTGATCACTTGTATGGGACTAAGGTTGGAGGGACAATTTTTGACAAGGAGGGTCACAGGCACACTGCTGCAGATTTGTTTCAATATGCTCATCCAAGAAGGGTTTCTGTTTATCTTCATGCCACTGTGAAAAAGATAACCTTTAAGTACAATAGAGAGACAAAGAGACCACAGGCTAATGGAGTGATTTTCAAAGATGAATTTGGAATCAAACACAGAGCATATTTAAGCAAGAAACCCATgaatgagataattttatcagCTGGTGCAATTGGAAGCCCTCAACTACTGATGCTAAGTGGCATTGGCCCTGCTCATCATCTTGAGGCTCATGGGATCAAAGTGGTTTTGGATGCACCCTTGGTGGGGCAAGGGATGGCTGATAATCCAATGAATGTCCTTGTAGTGCCTTCTCCTGCACCAGTTGAAGTTTCTCTTATCCAAACAGTGGGAATAACTAGGTCTGGTAGCTTCATTGAAACGGCTAGTGGATTGAGCTTTGGTCATTCTTGGGCTGAAAAGCTTCAGGGCATTTTTGAATTGGTGTCAAACCAGAGTGGCCAAACCTCCAAGTTTTCCCCAGAAGCCATGCAAAGTTTTGCAGATACCATTAGATCATTTGCCAATCCAACACTTAAAGGAGGAGTTatacttgaaaaaataatggGGCCACTTTCAACTGGCCATCTAGAACTCATAACCACTAGCCCCGATGATAACCCATCAGTTACCTTCAACTATTTCAAGGAACCAGAAGATCTGAGAATGTGTGTTGAAGGGATGAGAACCATCATAGAAGTGATAAATTCCAAGGCATTCTCCAAATTTCGGTATCCCAGCATGCCGGTTCAAGCTCTGATAGAGTTGATGATAAACTTGCCCGTGAACTTGAGGCCAAAACACCTAAGTGCTGCTATTTCTTTAGAGCAGTACTGCATAGACACTGTTATGACAATCTGGCATTACCACGGGGGCTGCCAAGTTGGTAAGGTCGTTGATCATGATTATAAGGTTATTGGTGTTGATGCTTTGAGGGTAATTGATGGCTCAACCTTTTATCGATCACCCGGGACCAATCCTCAAGCTACTGTTATGATGCTTGGAAGgtATATGGgcaaaaagattttaaatagaaGATTTCTCCATCTGAGGAAGTG 1730 0.422 MGWGLKQFFWAFLVAVVLFFNGLSYSEKAPAYTFVKEATSAPLVSFYDYIIIGGGTCGCPLAATLSQGARVLVLERGGSPYKNPDQININNFVNTLSDTSPTSFSQPFISRDGVLNTRARVLGGGSVLNAGFYTRASSKYIRDAGWNQTLARESYQWVEKLMTFEPAMLQWQSAVRNGLLEVGVLPYHGFTFDHLYGTKVGGTIFDKEGHRHTAADLFQYAHPRRVSVYLHATVKKITFKYNRETKRPQANGVIFKDEFGIKHRAYLSKKPMNEIILSAGAIGSPQLLMLSGIGPAHHLEAHGIKVVLDAPLVGQGMADNPMNVLVVPSPAPVEVSLIQTVGITRSGSFIETASGLSFGHSWAEKLQGIFELVSNQSGQTSKFSPEAMQSFADTIRSFANPTLKGGVILEKIMGPLSTGHLELITTSPDDNPSVTFNYFKEPEDLRMCVEGMRTIIEVINSKAFSKFRYPSMPVQALIELMINLPVNLRPKHLSAAISLEQYCIDTVMTIWHYHGGCQVGKVVDHDYKVIGVDALRVIDGSTFYRSPGTNPQATVMMLGRYMGKKILNRRFLHLRK 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01093 576 SUPERFAMILY FAD-linked reductases, C-terminal domain 317 516 - -
Bva04g01093 576 PANTHER OSJNBA0019K04.7 PROTEIN 5 570 - -
Bva04g01093 576 PIRSF Alcohol_oxidase 31 574 IPR012132 GO:0050660
Bva04g01093 576 ProSitePatterns GMC oxidoreductases signature 2. 280 294 IPR000172 GO:0016614|GO:0050660
Bva04g01093 576 Gene3D - 47 559 IPR036188 -
Bva04g01093 576 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 5 570 - -
Bva04g01093 576 Pfam GMC oxidoreductase 47 168 IPR000172 GO:0016614|GO:0050660
Bva04g01093 576 Pfam GMC oxidoreductase 218 321 IPR000172 GO:0016614|GO:0050660
Bva04g01093 576 SUPERFAMILY FAD/NAD(P)-binding domain 47 570 IPR036188 -
Bva04g01093 576 Gene3D - 164 509 - -
Bva04g01093 576 Pfam GMC oxidoreductase 415 560 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01093 Bva-Chr4 7272038 7274470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01093 7 573 Miscellaneous Gene Families AT5G51950 59.652 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01093 - - gmx:100780453 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01093 04 7272038 7274470 Bva04g01093 04 7272038 7274470 ECH