Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01086 ATGGCTCAGACTTCGGCTTCAGGTAACCATGATGATCTCATAAAAGAAGAGTGCAAGGACGCCACTGCACTGGTTGTTTGCTTTGGGGAAATGCTAATTGACTTTGTACCAACAGTGGGTGGAGTGTCACTTGCTGAAGCACCTGCATTCAAGAAAGCTCCCGGTGGCGCTCCTGCCAATGTGGCTGTTGGCATCTCCAGACTGGGGGGTTCGTCGGCTTTTGTAGGCAAGGTTGGAAAGGATGAATTTGGGTATATGTTGGCTGATATTTTGAAGCAAAACAATGTTGACATATCTGGTGTGCGGTTTGACGCTAGCGCAAGAACTGCTTTAGCTTTTGTTACACTTAGAGCTGATGGTGAGCGTGAATTCTTGTTCTTCCGAAATCCAAGTGCTGATATGCTTCTTCATGAATCAGAACTTgatgaaaatatcataaaacagGCAAGGATATTCCATTATGGTTCCATTAGCTTGATTGATGAACCATGCAAGTCTGCTCATCTTGCTGCTTTGAAAATTGCCAAGAACTCTGGTTGCATTCTATCTTATGATCCAAATTTGAGACTGCCACTATGGCCATCAGCTGAGGCAGCTCGGACAGGCATTATGAGCATATGGGATCAAGCTGATATCATAAAGATAAGTGAGGATGAAATCACATTTTTAACTGGTGGTGATGACCCTTTCGATGACAATGTTGTGATGACGAAGCTGTTTCATCCTAATCTTAAGCTTTTAGTTGTAACTGAAGGGTCAGCAGGTTGTAGATATTACACCAAGGAATTTAAGGGCAGGGTCGCCGGTGTTAAAGTTAAACCTGTAGACACAACAGGTGCTGGGGATGCTTTCGTTAGCGGGATGCTGTACAGCATTGCTTCTGATCCCACCATTTTTCAGGATGAGAAGCGTCTAAGAAAAGCTTTGTATTTTGCTAATGTATGTGGCGCCATCACTGTAACCGAGAGAGGGGCAATTCCTGCGTTGCCTACAAAAGAAGCTGTGCTTCAGTTCTTACTAGAAGCAGCTGCAATACAGCAACACTG 1046 0.4369 MAQTSASGNHDDLIKEECKDATALVVCFGEMLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFVGKVGKDEFGYMLADILKQNNVDISGVRFDASARTALAFVTLRADGEREFLFFRNPSADMLLHESELDENIIKQARIFHYGSISLIDEPCKSAHLAALKIAKNSGCILSYDPNLRLPLWPSAEAARTGIMSIWDQADIIKISEDEITFLTGGDDPFDDNVVMTKLFHPNLKLLVVTEGSAGCRYYTKEFKGRVAGVKVKPVDTTGAGDAFVSGMLYSIASDPTIFQDEKRLRKALYFANVCGAITVTERGAIPALPTKEAVLQFLLEAAAIQQH 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01086 348 SUPERFAMILY Ribokinase-like 25 339 IPR029056 -
Bva04g01086 348 CDD bac_FRK 24 326 - -
Bva04g01086 348 PANTHER HEXOKINASE FAMILY MEMBER 16 341 - -
Bva04g01086 348 PANTHER FRUCTOKINASE-7-RELATED 16 341 - -
Bva04g01086 348 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
Bva04g01086 348 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Bva04g01086 348 Pfam pfkB family carbohydrate kinase 24 331 IPR011611 -
Bva04g01086 348 Gene3D - 21 348 IPR029056 -
Bva04g01086 348 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Bva04g01086 348 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Bva04g01086 348 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01086 Bva-Chr4 7217264 7221061 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01086 K00847 - gmx:100778752 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01477 03 14041973 14046078 Bva04g01086 04 7217264 7221061 ECH
Bva04g01086 04 7217264 7221061 Bva04g01086 04 7217264 7221061 ECH