Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01084 ATGGCAATTGAATGCTTAACAAGCTTATCTTCCATTCCTCAATCAccaaagaaagagcaaaaagaAGAGCAACCACCATTAGTTTTTGATGCCTCGGTTCTCAGGCACCAAACCCATCTGCCAAAACAGTTCATTTGGCCTGATGAAGAGAAGCCATGCCTGAGTGCACCAGAGCTTGTAGTCCCACTAGTTGACTTGGGAGGGTTCCTCTCTGGTGACCCAGTTGCAGCCATGGAAGCTTCGAGACTTGTCGGCGAAGCATGCCGGAAACatggtttctttcttgttgTAAATCATGGGATTGATCCCAAATTAATCTCAGATGCTCATAGTTACATGGATGAGTTCTTTGAGCTTCCCCTGTCTCAGAAACAGAGAGCTCAGAGGAAAACAGGACAGCACTGTGGTTATGCCAGCAGCTTCACTGGCAGGTTCTCCTCTAAGCTCCCATGGAAAGAGACactctcttttcaattttcagctAAAGAAAACTCACCCAAGATTGTCAAGGACTACCTATGCAACAAAATGGGCCACGAATTCGAGCAATTCGGGCAGGTGAATCAAGAATATTGTGAAGCCATGAGCACTCTTTCTTTAGGTATAATGGAGCTTCTTGGAATGAGCCTCGGAGTTGGCAGAGCATTTTTCAAGGAATTCTTTGAAGAAAACAGTTCTATAATGAGGCTTAATTACTACCCGCCTTGCCAAAAACCTGACCTCACTTTAGGCACTGGCCCTCATTGTGATCCAACATCTTTAACTATTCTTCACCAAGACAAAGTGGGTGGCCTGCAAGTTTATGTTGACAATGAGTGGCATTCCATTAGCCCCAACTTCAATGCATTTGTGGTCAACATTGGTGATACCTTCATGgCTCTTTCAAATGGGAGATACAAGAGTTGCTTGCATAGGGCAGTGGTGAACAGCAAGACAAGAAGAAAGTCTCtggctttctttttgtgtCCAAGAAGTGATAAAGTGGTTAGTCCACCAAGTGAATTAGTGGACGATTTCAGTCCAAGGGTCTACCCAGATTTTACATGGCCTATTTTTCTAGAGTTCACTCAGAAGCATTATAGAGCTGACATGAAAACCCTTGAGGCATTCTCCAATTGGctccaacaacaacaaaaaaaata 1142 0.4081 MAIECLTSLSSIPQSPKKEQKEEQPPLVFDASVLRHQTHLPKQFIWPDEEKPCLSAPELVVPLVDLGGFLSGDPVAAMEASRLVGEACRKHGFFLVVNHGIDPKLISDAHSYMDEFFELPLSQKQRAQRKTGQHCGYASSFTGRFSSKLPWKETLSFQFSAKENSPKIVKDYLCNKMGHEFEQFGQVNQEYCEAMSTLSLGIMELLGMSLGVGRAFFKEFFEENSSIMRLNYYPPCQKPDLTLGTGPHCDPTSLTILHQDKVGGLQVYVDNEWHSISPNFNAFVVNIGDTFMALSNGRYKSCLHRAVVNSKTRRKSLAFFLCPRSDKVVSPPSELVDDFSPRVYPDFTWPIFLEFTQKHYRADMKTLEAFSNWLQQQQKK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01084 380 Pfam non-haem dioxygenase in morphine synthesis N-terminal 61 168 IPR026992 -
Bva04g01084 380 MobiDBLite consensus disorder prediction 1 25 - -
Bva04g01084 380 Pfam 2OG-Fe(II) oxygenase superfamily 226 323 IPR044861 -
Bva04g01084 380 Gene3D - 31 362 IPR027443 -
Bva04g01084 380 SUPERFAMILY Clavaminate synthase-like 32 363 - -
Bva04g01084 380 PANTHER ISOPENICILLIN N SYNTHASE-RELATED 17 376 - -
Bva04g01084 380 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 224 323 IPR005123 -
Bva04g01084 380 PRINTS Isopenicillin N synthase signature 248 269 - -
Bva04g01084 380 PRINTS Isopenicillin N synthase signature 84 101 - -
Bva04g01084 380 PRINTS Isopenicillin N synthase signature 283 309 - -
Bva04g01084 380 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 17 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01084 Bva-Chr4 7188660 7190365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01084 38 373 Glycosyltransferase AT5G59530 27.536 6.83e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01084 K05282 - gmx:100305378 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01084 04 7188660 7190365 Bva04g01084 04 7188660 7190365 ECH