Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01071 ATGGAAACCATTTCCAAGCAAAAGCGTGACCATCTGTTCTATGCAATCACCACCAACCAGTTCACTTTGTTTTCAaagcattttctttcaaatctcTTGGAATTTCTGTGGGTTTTGGCTCTCATACTCATAACATCCACGGAAGCATGTCTTCTCCGGCAAAATTGCAAACAAACCATGTTCCATTTCCTTttactcttccttttccttctctgtcTCATCTTCAAGCAATTCCTTACAAAGCCTAAACCAATTTACCTTGCGGATTTCTCATGTCTTAAACCTCAGTGCAGTTTAAGGGCACCTTTCTCCAGATTCCTCGAGAATGCCTCCATGATTGATGCTTTTGACAGTGAAAGCATAGCTTTCATGGCCAAAGTCCTCACTTCCTCAGGAATAAGTGAAGAGACATATCTTCCCCCAGCCTTACACTACATTCCTCCAAAAACCCATCAACGAGAATCCATCAAAGAAGCAGAAATGCTGCTTTTTCCCATCATGGACGATCTCTTAGCAAAAACCCAACTTTCACCCCTTGACATTGACATACTCGTTGTAAATTGCAGTGGGTTTTGTCCCTCACCCTCTTTGAGCTCCATTGTCATAAACAAATACTCCATGAGAAGTGACATCAAAAGCTACAATATCTCTAGCATGGGCTGCAGTGCAAGCGCTCTCTGTATAGATTTGGCCCATAATCTTCTGAAAGTTCACAACAATTCTAATGCTATAGTTCTTAGCACAGAGATTTTGTCAAACGGTTGGTATGCGGGTAATGAACAGTCCAAATTGCTAATCAACTGCCTCTTTTGGATGGGCAGTGCAGCAATTCTGCTCATAAACAGAACAGAAGCAAAGAAATCCTCAAAATACAAACTGATCGGGACGCTGAGAACTCAGAGAGCCTTTGACGACAAAGCTTATCTTTCAGCCTTTAGAGAGGAGGATTGTAATGGAAAACTTGGGGTGACCCTCCAAAGGGATTTGCTTCAGGTAGCTGGTGAAACTCTACGCACAAACATCTCCATTCTGGGCTctaaaatttttcctttttcagaGAAATTCTGGTATGGTGTTTCTGCAATGAAGAAGAGGTTCATCAACAAGGCTGAGGAAATTTATGTGCCAAAATTCAAGACTGCAATTCAGCATTTCTGCTTGCCATGTTCAGGGAGACCAGTGATCAGAGAATTAGGCAAAGGGTTGAAGCTTGCAGAGAGAGACATGTA 1229 0.402 METISKQKRDHLFYAITTNQFTLFSKHFLSNLLEFLWVLALILITSTEACLLRQNCKQTMFHFLLLFLFLLCLIFKQFLTKPKPIYLADFSCLKPQCSLRAPFSRFLENASMIDAFDSESIAFMAKVLTSSGISEETYLPPALHYIPPKTHQRESIKEAEMLLFPIMDDLLAKTQLSPLDIDILVVNCSGFCPSPSLSSIVINKYSMRSDIKSYNISSMGCSASALCIDLAHNLLKVHNNSNAIVLSTEILSNGWYAGNEQSKLLINCLFWMGSAAILLINRTEAKKSSKYKLIGTLRTQRAFDDKAYLSAFREEDCNGKLGVTLQRDLLQVAGETLRTNISILGSKIFPFSEKFWYGVSAMKKRFINKAEEIYVPKFKTAIQHFCLPCSGRPVIRELGKGLKLAERDM 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01071 409 SUPERFAMILY Thiolase-like 74 282 IPR016039 GO:0016746
Bva04g01071 409 PANTHER 3-KETOACYL-COA SYNTHASE 25 409 - -
Bva04g01071 409 PANTHER 3-KETOACYL-COA SYNTHASE 25 409 IPR012392 GO:0006633|GO:0016020|GO:0016747
Bva04g01071 409 Pfam FAE1/Type III polyketide synthase-like protein 79 365 IPR013601 GO:0006633|GO:0016020|GO:0016747
Bva04g01071 409 Gene3D - 101 409 IPR016039 GO:0016746
Bva04g01071 409 PIRSF Very_long_ch_3-ktacl-CoA_syn 6 409 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01071 Bva-Chr4 7078218 7079447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01071 35 405 Miscellaneous Gene Families AT1G25450 45.144 7.50e-116 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01071 K15397 - gmx:100813265 557.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01071 04 7078218 7079447 Bva04g01071 04 7078218 7079447 ECH