Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01063 ATGAGGCTCATAGTGCCGCTTCAAGGTGTAGTCCAAGGCAGAGGAGGCCTACTCTTGGGTTCCCTCATCCCATGTGCTCTCTTCTACTTCCTCCAGCTCTATCTCAAACGAAACCGTTCTTCCGATTCTTCTGTCGATCCTCCATCTCCAACTGGGTCCTCCTCTAATCTCACGGAGCTCCAACGCTCCTCGTCAAGATCCCATTTGTCCAGGGATGGATCCATTGGCCGGATTCGGGTCTCCTCCCTCGCGAGTTCTCTTGCCGAACCCAATGATTCGCCCTATTATATTGGATTGGAGAAAGTGTCTGAGGATCCATATGATAGATTCAACAATCCCAATGGGATAATCCAGCTAGGTTTATCTGAGAATAAGCTGAGCTTTGATTTAATTGAGAAGTGGATATCAGAGAATTTGAACCAGTCTCTAATTGGAAATGATGTCACTTTGAATATTAATGCAATTGCAACATACCAGCCATGTGATGGATTAAAGGAATGCAAAGAGGCCGTGTCAAATTTTATGTCTCAGATGATGGGAGGATCAGTGAATTTCGATCCATCTAATATAGTATTAACATCTGGAGCAACTTCTGCCATAGAGATGCTATCTTTCTGCTTAGCTGACCAGGGAAATGCTCTGCTAGTCCCTACACCTTATTATCCTGGTTTTGACAGGGATGTGAGATGGCGAACAGGAGTGGACCTAATACCCATTCACTGTCGTAGTGCTGACAATTTCTCTCTAACTATCACTGCTCTTGAACAAGCATTTACTCAGGCAAGAAAACAAGGAGTCAAAGTTCGAGGAATTCTCATTTCCAATCCTTCAAATCCTGTTGGCAGCCTGCTGTCTCGGCGCATGCTTTATTATCTTCTGGAGTTTGCCCGGGAGAAAAACATTCATATAATTTCTGATGAAATATTTGCAGGCTCCATATATGGAAGTGAGAAGTTTGTGAGCTTTGCTGAAATTCTTGATTCTGAAGATTTTGACAAGGACAGggttcatataatatatggcTTGTCCAAAGATCTATCTCTTCCTGGCTTCAGAGTTGGggttatatattcatttaacaACAATATCTTGTCTGCTGCCAAGAAGTTAAGTAGATTTTCCTCTGTATCGGCTCCAGTCCAGCAGCTAGTTACTTCAATGCTTTCAGATGAAAGATTTATTCTGGAGTACAttgaaatcaacaaaaatagaatacGACAAATTCATGATGAATTTGAGGCTCGTTTAAGTCAACTGGGAATAGAGTGTGCTAGGAGCAGTGCCGGTTTTTACTGTTGGGCTGATATGAGTGGATTAATACAACCGCACAGTGAGAAAGGAGAACTTGATTTATGGGATAAGTTTTTGAATCTTGCTAAGATCAATATAACTCCTGGATCAGCCTGCCATTGCATAGAACCAGGATGGTTTCGAATATGTTTTACTACCTTAACTTTGGAGGATATTCCTCTAATTATTGAGCGGATTAGGAAAGTTGTCGAAACTTGTAAGTCTTCTGCTTG 1523 0.4077 MRLIVPLQGVVQGRGGLLLGSLIPCALFYFLQLYLKRNRSSDSSVDPPSPTGSSSNLTELQRSSSRSHLSRDGSIGRIRVSSLASSLAEPNDSPYYIGLEKVSEDPYDRFNNPNGIIQLGLSENKLSFDLIEKWISENLNQSLIGNDVTLNINAIATYQPCDGLKECKEAVSNFMSQMMGGSVNFDPSNIVLTSGATSAIEMLSFCLADQGNALLVPTPYYPGFDRDVRWRTGVDLIPIHCRSADNFSLTITALEQAFTQARKQGVKVRGILISNPSNPVGSLLSRRMLYYLLEFAREKNIHIISDEIFAGSIYGSEKFVSFAEILDSEDFDKDRVHIIYGLSKDLSLPGFRVGVIYSFNNNILSAAKKLSRFSSVSAPVQQLVTSMLSDERFILEYIEINKNRIRQIHDEFEARLSQLGIECARSSAGFYCWADMSGLIQPHSEKGELDLWDKFLNLAKINITPGSACHCIEPGWFRICFTTLTLEDIPLIIERIRKVVETCKSSA 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01063 507 Gene3D Aspartate Aminotransferase, domain 1 105 492 IPR015422 GO:0003824
Bva04g01063 507 MobiDBLite consensus disorder prediction 40 71 - -
Bva04g01063 507 Gene3D - 139 390 IPR015421 GO:0003824
Bva04g01063 507 CDD AAT_like 158 498 - -
Bva04g01063 507 Pfam Aminotransferase class I and II 117 496 IPR004839 GO:0009058|GO:0030170
Bva04g01063 507 MobiDBLite consensus disorder prediction 40 73 - -
Bva04g01063 507 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 2 504 - -
Bva04g01063 507 PANTHER AMINOTRANSFERASE ACS12-RELATED 2 504 - -
Bva04g01063 507 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 119 145 - -
Bva04g01063 507 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 367 390 - -
Bva04g01063 507 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 265 289 - -
Bva04g01063 507 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 301 324 - -
Bva04g01063 507 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 152 168 - -
Bva04g01063 507 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 335 359 - -
Bva04g01063 507 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 189 209 - -
Bva04g01063 507 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 211 232 - -
Bva04g01063 507 SUPERFAMILY PLP-dependent transferases 93 501 IPR015424 -
Bva04g01063 507 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 341 354 IPR004838 GO:0003824|GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01063 Bva-Chr4 7013200 7017482 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01063 K14270 - qsu:111992969 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01063 04 7013200 7017482 Bva04g01063 04 7013200 7017482 ECH