Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01060 ATGAGCTTCGCTGCATACAAGATGATGCACTGGCCAACGGGCATCGAGAACTGTGCTTCTGGCTTCATCACGCATTCTCGTGCTGACTTTGTTCCCCCAGTTACACCGATTCAGACCGATGAACTTGACTCTGAGTGGTCCACCAGGCGTGGGATTGGTCCTATTCCCAACCTGGTTGTCACTGCAGCAAATATTCTGGAGGTATATGTCGTCAGGGTGCAAGAAGAAGGTAGCAGAGAGTCTAAGGGTCCTATAGAAGTCAAGCGTGGTGGTTTCATGGATGGAATTACTGGGGCTTCGCTCGAATTTGTTTGCCATTACAGGTTGCATGGTAATGTTGAAACCATGGCAGTGTTAAGCATGGGAGGTGGCGATGGTTCTAGGAGGAGAGATTCTATCATCTTAACTTTTAAGGACGCAAAAATTTCTGTTCTAGAATATGATGATTCTATAGATGGACTTCGTACCAGTTCTTTGCATTGCTTTGAGGGTCCAGAGTGGCTTCATTTGAAAAGAGGCAGAGAACAATTTGCGAGAGGTCCATTGTTAAAGGTTGATCCACAAGGCAGGTGTGGCGGAGTTCTTGTCTATGATTTGCAAATGATAATACTTAAGACTGCACAGGCTGGTTCTGTTTTAGGAGGGGAGGATGAAACCTTGGGTTCAGGAGGTGCAGTTGCTGCTCGCATTGAGTCATCTTATATGATAAATCTACGTGACTTAGATATGAGACATGTAAAAGATTTTACATTTGTACACGGCTATATTGAACCAGTAATGGTAATCCTGCATGAACGAGAGCTTACTTGGGCTGGGCGCGTCTCATGGAAGCACCATACTTGCATGATATCAGCACTTAGTATCAGcacaactttgaagcagcaTCCACTCATATGGTCAGCTGTTAATCTTCCCCATGATGCCTACAAGCTTCTTGCAGTGCCATCACCAATAGGTGGTGTTCTTGTAATTGGTGCTAATACAATTCATTATCATAGTCAGTCTGTCTCGTGTGCATTGGCCTTGAACAGTTatgctatttcatttgatagTAGTCAAGAGATGCCAAGATCAAGTTTCAATGTGGAGCTTGATGCTGCCAATGCGACTTGGTTATTGAGTGATGTAGCATTGCTGTCAACAAAAAGTGGTGAGCTGCTGTTGCTTACTCTTGTTTATGATGGAAGggTCGTGCAGAGACTTGATCTGTCCAAGTCAAAAGCTTCAGTTCTGTCATCTgGTATCACAACAATTGgaaattctctcttttttctcgcTAGCCGATTGGGAGATAGTATGCTGGTGCAATTTTCTTGTGGATCAAGGGTTTCAATGTTATCACCCAATGTAAAAGAAGAGGTGGGTGATATTGAAGGTGATGCTCCTTCGTCAAAGCGATTGCGCAGGTCTCCTTCTGATGTTTTGCAAGATATTGTTGGTGCTGAGGAGCTCTCCTTGTATGGATCTGCTCCAAATAGAACAGAATCTGCACAGAAAACCTTCTCATTTGCTGTGAGGGATTCTTTAACTAATGTTGGTCCTTTGAAAGATTTCTCTTATGGTTTAAGAATAAATGCTGATGCAAATGCAACTGGAATTGCCAAACAGAGTAATTATGAATTGGTGTGCTGTTCTGGTCATGGAAAGAATGGTGCTCTTTGTATTCTTCAGCAATCAATTCGCCCAGAAGTGATAACTGAGGTTGAACTTCCTGGATGCAAAGGTATTTGGACTGTTTATCATAAGAGCACACGTGGTCATAATACTGATTCTTCTAAGCTGGCTGACGATGATGATGAGTATCATGCATATCTGATTATAAGCTTGGAGTCTCGTACTATGGTACTTGAAACAGCTGATCTTCTAAATGAGGTTACTGAAAGTGTTGACTATTATGTTCAAGGAAGAACACTTGCTGCGGGAAATTTATTTGGAAGGCGTCGAGTTGTTCAAGTCTTTGAACATGGTGCCCGAATTCTAGATGGTTCTTTTATGACCCAAGAAATCAGCTTTGGAGCTTCAAACTCTGAATCTGGTCCTGGATCTGAGAGTGCTACAGTGCTGTCTGCCTCTATAGCTGATCCATATGTGTTACTCAGGATGAGTGATGGAAGTATTCGACTTCTAACAGGAGaTCCAACCAATTGCACTGTTTCTGTAACTTCACCTACTTCATTTGAGAGCTCAAAGAGATCAGTTTCTGCATGTACACTGTATCATGACAAGGGACCTGAGCCATGGCTAAGGAAGACAAGTACTGATGCATGGCTTTCTACTGGTATTGGTGAATCTATTGATGGTACTGATGGTGCTCCCCAGGATCATGGGGATATTTATTGTGCTGTTTGTTATGAAAGTGGTGCccttgaaatatttgatgtgcCCAATTTGAGCTGTTTTTTCTCTgtggataaatttatttctggAAAGACTCAACTTATTGATACTCTCACAAAGGAGCCACCAAAAGATTctcaaaaagaagataaaggtTCTGAAAAAGTGACTGGCCTTGGCAGGAAGGAAAGTGTACAGAATATGAAGGTTGTAGAGTTGGCCATGCAGAGATGGTCAGGACAGCATAGTCGCCCATTTCTTGTTGGGATTTTGAGTGATGGAACAATTCTCTGTTACCATGCTTACCTGTATGAAAGTTCAGATGGTACTTCTAGAGTTGAGAATTCAGTATCTGCAGAAGGATCTGTTGGCCTTAATAGTACTAGTTCTAGGCtaagaaatttgagatttgTTCGTGTCCCTTTGGATGCATATGCCAGGGAGGAGACATCAAGTGGATCCCCACGTCAAAGAATAACTTTTTTCAAGAATATAGGAAGTTATCAAGGATTCTTCCTATCAGGATCAAGACCAGCTTGGGTGATGGTGTTCAGAGAACGGCTTCGGGTTCATCCACAGCTATGTGATGGATCTATTGTTGCTTTTACCGTCCTTCATAATGTGAACTGCAATCATGGACTCATATATGTTACTTCACAGGGCGTTTTAAAGATTTGCCAGTTGCCATCTGGCTCAAGCTATGATAACTACTGGCCTGTACAGAAAATTCCATTGAAAGCTACTCCACATCAAGTAACTTACTTTGCAGAGAAGAATTTGTACCCGCTTATTGTATCAGTCCCTGTCCTTAAGACACTGAATCAAGTTGTTTCATCTCTGGTTGACCAAGAGACGAATCATCAGACTGAGAGTCAAAATTTGAGTTCTGATGAGCAAAATCGCTTTTATGCTGTTGATGAGTTTGAGGTTCGTATTATGGAGCCAGAAAAATCTGGTGGCCCTTGGCAAACAAGGGCAACAATACCTATGCAGAGTTCTGAAAATGCACTGACTGTGAGAATGGTCACATTGTTGAACACgtccacaaaagaaaatgaaacgcTTCTAGCCATTGGCACTGCTTATGTGCAAGGAGAGGATGTTGCTGCCAGAGGACGTgtacttttgttttctttgggAAAAAACCCTGATAATCCTCAAGCTCTGGTTTCAGAGGTCTACTCAAAAGAATTGAAGGGCGCAATATCTGCTCTGGCTTCACTTCAGGGCCATTTGTTGATAGCTTCTggtccaaaaattattctgCACAAGTGGACTGGTACTGAGTTGAATGGTATTGCATTTTATGATGCTCCACCATTGCATGTTGTGAGCTTAAATATTGTCAAAAACTTCATCCTTATTGGTGACATCcataaaagcataaattttcttagttGGAAGGAACAGGGCGCTCAACTTAGCTTATTAGCCAAGGATTTCGGTTCTCTTGATTGCTTTGCAACTGAATTCTTGATTGATGGAAGTACTCTGAGTCTTATGGTTTCAGATGATCAAAAGAACATCCAGATCTTTTACTATGCGCCGAAGATGTCTGAGAGTTGGAAAGGACAGAAGCTTCTTTCGAGGGCTGAATTTCATGTCGGTGCCCACGTGACTAAATTCTTGCGGTTGCAGATGTTGTCCACCTTTTCTGATCGGGCTGGTTCTGCACCAGGTTCAGATAAAACCAATCGCTTTGCTTTATTGTTTGGCACCCTGGATGGCAGTTTTGGTTGCATTGCACCTCTTGATGAAATCACCTTTCGTAGACTACAATCTTTACAGAGAAAGCTTGTCGATGCTGTTCCCCATGTTGCTGGCTTAAATCCGAGAGCTTTCAGACAGTTCCGCTCAAATGGAAAGGCTCACCGGCCGGGCCCTGACAGTATAGTTGACTGTGAACTGCTATGCCATTATGAAATGCTGCCATTAGAGGAACAGCTTGAAATTGCTCACCAGGTTGGGACTACTAGATCACAGATTCTCACAAATCTGAGTGACTTGTCTCTTGGAACAAGCTTCTTGTG 4367 0.4078 MSFAAYKMMHWPTGIENCASGFITHSRADFVPPVTPIQTDELDSEWSTRRGIGPIPNLVVTAANILEVYVVRVQEEGSRESKGPIEVKRGGFMDGITGASLEFVCHYRLHGNVETMAVLSMGGGDGSRRRDSIILTFKDAKISVLEYDDSIDGLRTSSLHCFEGPEWLHLKRGREQFARGPLLKVDPQGRCGGVLVYDLQMIILKTAQAGSVLGGEDETLGSGGAVAARIESSYMINLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSVSCALALNSYAISFDSSQEMPRSSFNVELDAANATWLLSDVALLSTKSGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSRVSMLSPNVKEEVGDIEGDAPSSKRLRRSPSDVLQDIVGAEELSLYGSAPNRTESAQKTFSFAVRDSLTNVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGALCILQQSIRPEVITEVELPGCKGIWTVYHKSTRGHNTDSSKLADDDDEYHAYLIISLESRTMVLETADLLNEVTESVDYYVQGRTLAAGNLFGRRRVVQVFEHGARILDGSFMTQEISFGASNSESGPGSESATVLSASIADPYVLLRMSDGSIRLLTGDPTNCTVSVTSPTSFESSKRSVSACTLYHDKGPEPWLRKTSTDAWLSTGIGESIDGTDGAPQDHGDIYCAVCYESGALEIFDVPNLSCFFSVDKFISGKTQLIDTLTKEPPKDSQKEDKGSEKVTGLGRKESVQNMKVVELAMQRWSGQHSRPFLVGILSDGTILCYHAYLYESSDGTSRVENSVSAEGSVGLNSTSSRLRNLRFVRVPLDAYAREETSSGSPRQRITFFKNIGSYQGFFLSGSRPAWVMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSGSSYDNYWPVQKIPLKATPHQVTYFAEKNLYPLIVSVPVLKTLNQVVSSLVDQETNHQTESQNLSSDEQNRFYAVDEFEVRIMEPEKSGGPWQTRATIPMQSSENALTVRMVTLLNTSTKENETLLAIGTAYVQGEDVAARGRVLLFSLGKNPDNPQALVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGTELNGIAFYDAPPLHVVSLNIVKNFILIGDIHKSINFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTFSDRAGSAPGSDKTNRFALLFGTLDGSFGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAFRQFRSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAHQVGTTRSQILTNLSDLSLGTSFL 1455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01060 1455 Gene3D - 975 1362 IPR015943 GO:0005515
Bva04g01060 1455 Gene3D - 55 447 IPR015943 GO:0005515
Bva04g01060 1455 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1 2 1446 - -
Bva04g01060 1455 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 2 1446 - -
Bva04g01060 1455 MobiDBLite consensus disorder prediction 820 837 - -
Bva04g01060 1455 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 133 712 IPR018846 -
Bva04g01060 1455 MobiDBLite consensus disorder prediction 817 838 - -
Bva04g01060 1455 Pfam CPSF A subunit region 1087 1420 IPR004871 GO:0003676|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01060 Bva-Chr4 6984231 6997697 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01060 K14401 - gmx:100785543 2507.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01060 04 6984231 6997697 Bva04g01060 04 6984231 6997697 ECH