Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00979 ATGCATTGTGCGCTTCAACAAATAGGCACTGATAGCTCGAAAGTTTCAAAAGCACAAAAGGATTCCTTATCAAGGAAATatcaagaacaaaatatttgtGCAACATATTTGAAGGATTGTGAAGAATCTTCCGTTTCAAGGAGCAACTCCGATAGTagGTTTGCGATCGTTGAATTCTTTACACTTAAGCCTGATGGGAACTGGAGAATTGTTGCAGTGCCAGTGCGGTGTCTTAATCATATAAGCTCAACTTCTCATGTAAGCATGGATGGTCTACAACTAGTTTTTCCACCACCTCTGAATAGGTTGAAGATTGATCAATGTAAGGGGCACGGAGGACTCCTTCCTGAGTATGGTCATTCAGTGAAATCACTAAATGGAGGAAGCATTACTGGGTCAAAAGTTCATCGTAGATGCCAGAATAAGATTGCTAGCAGAGCTTCTAAACTTTATGAACTCTCTGGGAATTCTTTTTCCCAAAGTTCATTGATCTGCAGTAATTCCTCAGATTTGTTCCCTGCTAGTTCTGAAGTTAATTCATCTGATATGTTCATGAGCAATTCAAAAGGAGACAAGCCtttgaaaaagaattcaagaaaaaaatcaagaaagagaagtAGACAGACCAAGAAGCAGTCACGTGACAGTGCCTCAACTGCACCAGAAGTTCTTCCTGAGGAATATGTCCATGTAGGTTCAACATCTACAAGCCTCTGTAGCAACGATGTGGATAATGAAGTCAGACTGATGTCATATTCAACTGATCTGGAAACTTCATTTTCTGATGATAGACTGATTAAAAATGATTCTGCAAGGAGGGAAATGGATGACAACCTTGCTGAAGCAGCTAAGGCTTGCTACTCTTACCTTGACGAGATGGAGATGTCAGAAGTTACCTCACACACAGTTCAGAAATCTTCAGGACAATCTGAAATATGTGATTCCAAGAATGAGATTCAAAATAGAGGACCTGAATTTGAAGATATAGATGGAGAGATGGAGGATAAGCAAAAGGACCAGATATGCTGTTTTAATGGTATGTATTCTAAAGAAGCCTCTCAGATACAAGATTCCTTGGTGTTAGGTTCAGTTTCTGTTGGTTCAAACAGTGATGAAAGTACCAATGTTGGTGATATTGTCAAACCATCTTACAAAGCAAGTTGCGCAATTGGTCTTGCAGTACCACCTGGGTTTAATTCAGGAGATGGATGCATTCTTGGTCACAAATTAAATGGTGTTGGCAATACCTGTGATCAAGATGACCAAATGAGACATGGTGCTCTGAATTGCAGCAATAATGACAAGAAAGTtaagcaaaagagaaaagcacAACAGAATTCAGGTGTTAACAAATTTGGAGGTGTTGGAAATTTTCATGGCCGAACAGGGAAGGAAAATAGTCATTCTGTCTGGCAAAAGGTTCAGAAGAATGACCATGATGAATGCAATGGTGATATGAAGAAAGTAAATTCAACTTTCTCACAATCTGATGCCGCTATGAAAAGAGCTCCTCCTATTGACAAAAGCTGTAATTTTACTGGTGCAAATATCCTATCAAaatcagaagaaaagaagcacctaaaaaataatgttggTAGGAaatcaaagggaaaaaaggaCCAAGCTTCACAAAAAGAGCACTGCAGCTATGCAAGGAAGGGATCCCATTTTAACAGGGTCATCTTAAACGATAATGCAAAAACTAGTGTTCAACAGAATGGCATGTTATATATCTCATCTCAGGAAGAAAATCAAGGATTGACTAGTTCCTCTGGATCTCATTACGATATTAATTCTCCAAGAGTTGGGCATCAGAGCGGCCAAGTTGAACAAATGGCATCTGAATCAGTTCACAGTGCTCAAATGCATCTGGAGGAATCAAAGCCACCAAAAAGTGTACGGAACACCATTTGTACCATGACAGATCGAAATAAAGATAATCAAGATAGCTCATCGCCAATGCCATATGACCGCATCAATCAATTACGTATGTCTGAGGAGCAATATCCATTCTATCATCATCTTTTAAAAGACAAGGTTGGTCAAATAGATAAAGAAGTTTCTTCTGCAGGCTACAATGAGCAAAACACCAGTGCTGGATCTACCCTTTGGAAATGGATACCAATTGGGAAAAAGGAGACAGGGTTGGCATTTTCTGAATCTACTAGTTCATTGGTGGAATATTCTGACAGACCACCTAATAAGGATATCATGTTGGAAAGTAATGTTTCACCCAAAGGGGTTtctatttctcaaaataatgtTTCTTCATCAAATGAGAGCAGAACATGTGTGGGTCAGACGGAcagtaatttttcttgtctggATGAGGATGAGAATCAGAAATTGCTGACAGAGAAGAGTGACAAGTATGTAGCAGCTAATCACTTGATTTGTGAATGCGAGAATCAAGATGTTCTAGGAAGTtattcatacaaaatatcTCAAGCCATCAATGATGTTTGCAAGGTACAAAAAGCTTGTGAAGCTGTTCATATAGCAACTGGTGGGCCAATGGCAGAGTTCGAAAGACTTCTCCATTGTTGTAGTCCTGTTATTTGTCAATCACCCAATGTGATCCATGCTGATGGTATCCCACTGTGCAAACATGAGACACCAGACCTATCTTTGGGATGCCTATGGCAGTGGTATGAGAAACATGGTAGCTATGGGTTAGAGATAAAGGCTCAGGATTGTAAAAGTCCAACAGAAGTGGGCGCTTGCTGTTTTCCATTCCGTGCTTACTTTGTCCCTTCTTTGTCAGCGGTTCAGCTTTTTAAGAACCATAAATGTCAGTGTGTAAAAAGCAGCGATAAATTTCCTCATTGCAAGGCTTCAGAAGTATGTGAAACCAGTAACATCAACGTGTCTGCTGCCAGTCAAGATGCAAGCATTCTAACACCCACAAATCAGATACATTGTTCTGAAGCACCTTTTACTTCTAATAAAGATAATGCATCAGCTCGATCTATCAACTCAACATGCTCGGGTGATTTAGAGCtcctttttgaatattttgaatcTGAGCAGCCTCAACAAAGACGGCCGCTATTTGAGAAGATGCGGGAACTGGTGAGAGGTGATGTATCAGCCCAGTCTGAACTGTATGGGGACCCTTCTAAACTGGACTCAATAAACTTGCAAGATCTTCATCCCAGATCCTGGTACTCAGTGGCATGGTATCCTATTTACCGAATACCAGATGGCAACTTTCGTGCATCTTTCTTGACTTACCATTCATTTGGACATTTGGTTAATAGAAGTACAAAAACTGGTTCACTAACTGTAAATTCTGGTATAGTGGCTCCAGTTGTGGGCCTTCAAAGTTACAATGCCCAGGGTGAATGCTGGTTCCAGCTGAGGCATTCTGCTGTGAGTGCAGAAAATCTGGGCTTAAACCCTTCTATGCTTCTTAAAGAGCATTTAAGGACACTTGAAGAAACAGCATCTCTCATGGCAAGACTTGTTGTCAACAAGGGAAATCAGATCTGCACAAACAGGCAGCCTGATTACGAGTTCTTCCTCTCCAGACGACGCTATTG 3542 0.3854 MHCALQQIGTDSSKVSKAQKDSLSRKYQEQNICATYLKDCEESSVSRSNSDSRFAIVEFFTLKPDGNWRIVAVPVRCLNHISSTSHVSMDGLQLVFPPPLNRLKIDQCKGHGGLLPEYGHSVKSLNGGSITGSKVHRRCQNKIASRASKLYELSGNSFSQSSLICSNSSDLFPASSEVNSSDMFMSNSKGDKPLKKNSRKKSRKRSRQTKKQSRDSASTAPEVLPEEYVHVGSTSTSLCSNDVDNEVRLMSYSTDLETSFSDDRLIKNDSARREMDDNLAEAAKACYSYLDEMEMSEVTSHTVQKSSGQSEICDSKNEIQNRGPEFEDIDGEMEDKQKDQICCFNGMYSKEASQIQDSLVLGSVSVGSNSDESTNVGDIVKPSYKASCAIGLAVPPGFNSGDGCILGHKLNGVGNTCDQDDQMRHGALNCSNNDKKVKQKRKAQQNSGVNKFGGVGNFHGRTGKENSHSVWQKVQKNDHDECNGDMKKVNSTFSQSDAAMKRAPPIDKSCNFTGANILSKSEEKKHLKNNVGRKSKGKKDQASQKEHCSYARKGSHFNRVILNDNAKTSVQQNGMLYISSQEENQGLTSSSGSHYDINSPRVGHQSGQVEQMASESVHSAQMHLEESKPPKSVRNTICTMTDRNKDNQDSSSPMPYDRINQLRMSEEQYPFYHHLLKDKVGQIDKEVSSAGYNEQNTSAGSTLWKWIPIGKKETGLAFSESTSSLVEYSDRPPNKDIMLESNVSPKGVSISQNNVSSSNESRTCVGQTDSNFSCLDEDENQKLLTEKSDKYVAANHLICECENQDVLGSYSYKISQAINDVCKVQKACEAVHIATGGPMAEFERLLHCCSPVICQSPNVIHADGIPLCKHETPDLSLGCLWQWYEKHGSYGLEIKAQDCKSPTEVGACCFPFRAYFVPSLSAVQLFKNHKCQCVKSSDKFPHCKASEVCETSNINVSAASQDASILTPTNQIHCSEAPFTSNKDNASARSINSTCSGDLELLFEYFESEQPQQRRPLFEKMRELVRGDVSAQSELYGDPSKLDSINLQDLHPRSWYSVAWYPIYRIPDGNFRASFLTYHSFGHLVNRSTKTGSLTVNSGIVAPVVGLQSYNAQGECWFQLRHSAVSAENLGLNPSMLLKEHLRTLEETASLMARLVVNKGNQICTNRQPDYEFFLSRRRY 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00979 1180 MobiDBLite consensus disorder prediction 582 606 - -
Bva04g00979 1180 MobiDBLite consensus disorder prediction 521 551 - -
Bva04g00979 1180 Pfam Protein of unknown function (DUF789) 840 1174 IPR008507 -
Bva04g00979 1180 MobiDBLite consensus disorder prediction 177 227 - -
Bva04g00979 1180 PANTHER DUF789 FAMILY PROTEIN 1 1179 - -
Bva04g00979 1180 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 1 1179 - -
Bva04g00979 1180 MobiDBLite consensus disorder prediction 194 210 - -
Bva04g00979 1180 MobiDBLite consensus disorder prediction 428 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00979 Bva-Chr4 6420675 6429434 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00979 - - aprc:113867773 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00979 04 6420675 6429434 Bva04g00979 04 6420675 6429434 ECH