Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00978 ATGGTTCAAAATGGAGATGGGGATAGAGTGGAAAATGAGGATGCAAGAGATGAGCATGATCCTAACCAGAAGGGCTTGAAgctggaagaagaagagatttCCCTGGAGAGGGTGTTTGAGAGCCAAGCAGTGCCATCATGGAGGAACCAGTTAACCGTAAGGGCCTTTGTGGTGAGCTTGGTGCTGACCGTACTCTTCTGTTTCATAGTGATGAAGCTGAACCTCACCACTGGGATTATCCCTTCACTCAATGTATGTGCTGGGCTTCTGGGTTTCTTCTTTGTCAAGACTTGGACCAAGTTTTTGGAGAAATCTGGCTTGTTACAACAACCCTTTACTAGGCAGGAGAACACTGTCATCCAAACCTGTGTTGTTGCCTCCTCTGGCATCGCCTTTAGCGGTGGTTTCGGGAGTTACCTCTTTGGAATGAGTGAACGTATTGCCAAACAATCATCAGATAATACAAATATCAAGAACCCAGGATTAGGATGGTACATTGGATTTCTGTTTGTTGTTAGCTTTCTTGGCCTTTTCTCAGTTGTACCTCTTCGAAAGATTATGATTATTGACTTCAAATTGACATATCCGAGTGGTACTGCAACTGCTCATCTCATCAACAGCTTCCACACCCCTCAAGGAGCCAAATTAGCAAAgaagcaagtgaaaacattGGGAAAATTCTTCACTTTCAGTTTTTTATGGAGTTTCTTTAAATGGTTCTATAAAGCTGCAGATAATTGTGGATTTGCAAGCTTCCCTTCACTGGGTCTCAAAGCATACAAGTACAAgttttattttgatttctctgcAATCTATGTTGGAGTGGGCATGATTTGCCCATACATCATAAACATATCATTGCTCCTTGGGGGAATACTTTCTTGGGGAATAATGTGGCCActcatagaaaagaaaaagggtgaTTGGTACCCTGCAAATGAGAAGGAAAGCAGCATGCATGGCCTCCAAGGTTACAAGGTGTTTATAGCCATAGCCATGATCTTGGGAGATGGTTTATATAACTTCTTCAAGGTACTGAGTCATACCCTCTCAGGAATGTACCATCAAATCAGGGACAAACAAAGGGAGAATGTTCTTCCTGTCGATCAGACCTCTTCCTCAAGTCCTAAACTGTCTTACGATGAGCATCGCCGGACCCAACTCTTTCTCAAAGATCAAATTCCCACGTGGTTCGCAGTCAGCGGCTATGTTGTCATTGCTGCCATCTCTATAGCCACTCTTCCCCACATCTTTAATGAACTGAAATGGTACTACGTATTGGTCATCTACTTAATTGCTCCCACGTTAGCATTCTGTAATGCTTACGGTTGTGGGCTAACAGATTGGTCCCTTGCCTCCACCTATGGAAAGCTTGCCATCTTCACAATTGGGGCATGGGCTGGTGCAGCACATGATGGAGTTCTTGCTGGCCTAGCAGCCTGTGGAGTCATGATGAACATTGTCTCCACAGCTTCTGACCTCACACAGGATTTTAAGACTGGCTACCTTACCCTGGCTTCACCTCGTGCCATGTTTGTGAGCCAGATTATCGGCACAGCAATGGGTTGCATCATCTCTCCTTGTGTCTTTTGGATTTTCTACAATGCATTTGATGACCTTGGGTCGCCAAAAAGTGAATATCCTGCCCCATATGCAGTTATATACCGCGGCATGGCCAAACTGGGAGTAGAAGGCTTTTCATCTCTGCCAAAGAACTGCCTCCTGCTTTGTTATATATTCTTTGGCTCTGCCATTGTGGTAAACTTGATCAAAGACTTGTTGGGTAAGATTGGAAGGTATATACCCTATCCAATGGCAATGGCAATACCTTTTATTTTAGGTCCATACTTTGCCATTGACATGTGTGTTGGAAGTCTGATATTATTTGTGTGGGAAAAGATAAACAAGGCCCAGGCAGATGCTTATGGGCCAGCAGTAGCTTCTGGTTTGATATGTGGGGATGGTATATGGACTCTACCTGATTCAATACTGGCTCTTGCAAAAGTTGAGCCACCAATTTGCATGAAGTTCTTGTCAAGGGCGACAAATGCCAGAGTTGATGGATTCTTAGGCTCTTA 2078 0.4259 MVQNGDGDRVENEDARDEHDPNQKGLKLEEEEISLERVFESQAVPSWRNQLTVRAFVVSLVLTVLFCFIVMKLNLTTGIIPSLNVCAGLLGFFFVKTWTKFLEKSGLLQQPFTRQENTVIQTCVVASSGIAFSGGFGSYLFGMSERIAKQSSDNTNIKNPGLGWYIGFLFVVSFLGLFSVVPLRKIMIIDFKLTYPSGTATAHLINSFHTPQGAKLAKKQVKTLGKFFTFSFLWSFFKWFYKAADNCGFASFPSLGLKAYKYKFYFDFSAIYVGVGMICPYIINISLLLGGILSWGIMWPLIEKKKGDWYPANEKESSMHGLQGYKVFIAIAMILGDGLYNFFKVLSHTLSGMYHQIRDKQRENVLPVDQTSSSSPKLSYDEHRRTQLFLKDQIPTWFAVSGYVVIAAISIATLPHIFNELKWYYVLVIYLIAPTLAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGAAHDGVLAGLAACGVMMNIVSTASDLTQDFKTGYLTLASPRAMFVSQIIGTAMGCIISPCVFWIFYNAFDDLGSPKSEYPAPYAVIYRGMAKLGVEGFSSLPKNCLLLCYIFFGSAIVVNLIKDLLGKIGRYIPYPMAMAIPFILGPYFAIDMCVGSLILFVWEKINKAQADAYGPAVASGLICGDGIWTLPDSILALAKVEPPICMKFLSRATNARVDGFLGS 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00978 692 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 17 691 IPR045035 GO:0035673
Bva04g00978 692 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 47 660 IPR004813 GO:0035673
Bva04g00978 692 Pfam OPT oligopeptide transporter protein 50 663 IPR004813 GO:0035673
Bva04g00978 692 MobiDBLite consensus disorder prediction 7 23 - -
Bva04g00978 692 MobiDBLite consensus disorder prediction 1 23 - -
Bva04g00978 692 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL8-RELATED 17 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00978 Bva-Chr4 6414090 6418088 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00978 - - gmx:100814953 1113.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00978 04 6414090 6418088 Bva04g00978 04 6414090 6418088 ECH