Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00973 ATGTCTCCGTCAAATGGTTTGCAGAAcggaggaggaggagggggAAGCGGTAATGGGGTCAATTATATAGAACATCCGGTGTCGAAATTGGACACTCTCGCCGGCGTGGCCATCAAGTACGGTGTGGAGGTTGCTGACATAAAAAAGATGAACAATTTAGTCACAGATCTTCAAATGTTTGCACTGAAGACATTGCGAATTCCGTTGCCGGGACGACATTCTCCATCTCCCAGTCCGCCTAATGGATCTGCCATTTTGGGAGAAGATATCACACAAAGGAGACCTCTCCACTTAGGTCAATCTGGCATGCAGGAACCTTTCCAGTCCTTTCGATTGGGAGCACCTCGACAGAAGATCTCGCAGGCTATGAGCACTTTACACAGTTACTATGGACTCAAGTCTTCAGGTCTCGGGGGTAAAACTGAAGAAACAGAAATGGCAGTTTATAGATCTAATGGTTCTGATGATTGCAGAGATGAATGGCTTCAGAAAGCCTCACTAGTTCTGCACACACCATCAAACCATCTTCCCAAGTCAAGAAATTCATCTTATGATTTACTATCTGAATATGAGCCTCGTGCAGAAACTGGGGATGGGACAAGTCAGAAGTCTGATGAGAAATCTGTCCGGCGTCAGAAAGCTGAAGTTGATAATGGAGCTGTTACCCCAGAAAGGttgttgaaagaagaaaagaacgGTGCCACCACCGGTTTCTCTCCTTCAACAGGAAAAGGTTTATCCATGAGGACAAAATCAGCTAGCCGATCAGTCCTCCTTGCCGAGTCCGAGTCAACATGGTTAGACCCTATTCCAATTGGATTGGGAGAACCTGTCATGACCGATGGCCTTTCTGCAGTGCGCAAATCGTCGAGTGCATCCAGCCTCAAAGAACAGGAAAATAACTACTCAGCAACAGTCTGGTTGCCTGCAAAATGGAGCTTGAAACCAGACTTGCAAGCTCTCTCAACTGCAGCCATGGCCAAACCCATCTTTGATGGCCTACCATTACCAATCCCAATAACCGGCCGGAGAAACAAGGCTGCCCTTGATTA 1052 0.4506 MSPSNGLQNGGGGGGSGNGVNYIEHPVSKLDTLAGVAIKYGVEVADIKKMNNLVTDLQMFALKTLRIPLPGRHSPSPSPPNGSAILGEDITQRRPLHLGQSGMQEPFQSFRLGAPRQKISQAMSTLHSYYGLKSSGLGGKTEETEMAVYRSNGSDDCRDEWLQKASLVLHTPSNHLPKSRNSSYDLLSEYEPRAETGDGTSQKSDEKSVRRQKAEVDNGAVTPERLLKEEKNGATTGFSPSTGKGLSMRTKSASRSVLLAESESTWLDPIPIGLGEPVMTDGLSAVRKSSSASSLKEQENNYSATVWLPAKWSLKPDLQALSTAAMAKPIFDGLPLPIPITGRRNKAALD 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00973 350 MobiDBLite consensus disorder prediction 191 249 - -
Bva04g00973 350 MobiDBLite consensus disorder prediction 196 231 - -
Bva04g00973 350 CDD LysM 31 67 IPR018392 -
Bva04g00973 350 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 16 350 - -
Bva04g00973 350 Gene3D LysM domain 16 77 IPR036779 -
Bva04g00973 350 MobiDBLite consensus disorder prediction 234 249 - -
Bva04g00973 350 SUPERFAMILY LysM domain 23 68 IPR036779 -
Bva04g00973 350 ProSiteProfiles LysM domain profile. 23 67 IPR018392 -
Bva04g00973 350 PANTHER LOC443603 PROTEIN-RELATED 16 350 IPR045030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00973 Bva-Chr4 6386848 6389557 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00973 - - gmx:100786430 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00973 04 6386848 6389557 Bva04g00973 04 6386848 6389557 ECH