Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00962 ATGGAGACACAAGCACTCCACAATTTCTCACTCTCTTCTCCTCCGTTGGTATCTATCCACCACACCCTACCTTTTGCTCCTCCCAAACGACGTCGGATTCGcgatcatcttcatcattgtGTCAAAGCAGAGATCCAAGAAATTCGGGTATGTACAAATCGCACTTGTCGCAAACAAGGCTCATTCGAAACCCTAGAGACCCTCTCTGGGCTTGCTCCTCCAAGCATCACCGTTAAGCCTTGTGGCTGTTTAGGACGGTGCGGTGCTGGTCCCAACCTTGTTGTGCTGCCAGACGGCCTCATTGTCGGTCATTGTGGTACGCCGGCGAAAGCAGCTGAGCTCATGGTGAACTTTTTAGTTGTAGAAGAGAAGCTTGATTCGAATGATGCCAAGAATAGTTTGGATGCGCTTGCCTTGAGAAAGAGAGCGGAAATTGAGTTCCAGAAGAACAATTTCTCTGAGGCTGAGCTTCTGCTCTCACAAGCTATAGAATTAAAACCATTTGGTGGTattcatgtaatatataaatgcagGTCAATGGTGAGGTTGGCATTAGGAAACTACCCTGGGGCTCTTGAAGATGCCAGAGAAGCTCTAAAATTAGCTCCAGAATATGCTGAGGCTTATATTTGCCAAGGTGATGCATTTTTGGCATTGGACCAATTTGATTCAGCAGAAAAATCATACTCAATATCTTTGGATATAGATCCTTCTATCCGTCGCTCTAAATCTTTCAAGgcTAGGATCACTAAGCTTCAGGAAAAGCTAGCTGCTGCAAATATTTCATA 788 0.4315 METQALHNFSLSSPPLVSIHHTLPFAPPKRRRIRDHLHHCVKAEIQEIRVCTNRTCRKQGSFETLETLSGLAPPSITVKPCGCLGRCGAGPNLVVLPDGLIVGHCGTPAKAAELMVNFLVVEEKLDSNDAKNSLDALALRKRAEIEFQKNNFSEAELLLSQAIELKPFGGIHVIYKCRSMVRLALGNYPGALEDAREALKLAPEYAEAYICQGDAFLALDQFDSAEKSYSISLDIDPSIRRSKSFKARITKLQEKLAAANIS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00962 262 Pfam Tetratricopeptide repeat 182 237 - -
Bva04g00962 262 Gene3D Tetratricopeptide repeat domain 129 261 IPR011990 GO:0005515
Bva04g00962 262 SUPERFAMILY Thioredoxin-like 48 115 IPR036249 -
Bva04g00962 262 Gene3D Glutaredoxin 46 128 - -
Bva04g00962 262 CDD TRX_Fd_family 48 115 - -
Bva04g00962 262 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN 23 261 - -
Bva04g00962 262 ProSiteProfiles TPR repeat profile. 206 239 IPR019734 GO:0005515
Bva04g00962 262 SUPERFAMILY TPR-like 132 255 IPR011990 GO:0005515
Bva04g00962 262 SMART tpr_5 206 239 IPR019734 GO:0005515
Bva04g00962 262 SMART tpr_5 172 205 IPR019734 GO:0005515
Bva04g00962 262 SMART tpr_5 136 169 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00962 - - gmx:100813823 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00962 04 6322806 6327659 Bva04g00962 04 6322806 6327659 ECH