Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00957 ATGGCTTCCAACTTTGTCTTGAAGAGATCAGATACCATTGCAGATAGCATGCCTGAGGCCCTGAGGCAGAGCCGCTTTCATATGAAGAAATGCTTTGCTAGGTTTGTTGCAGATGGGAAGAGACTGATGAAAAGGCAAGAAATAATGGAGGATGTGGAAAAATCAATTGAAGATAAGGCTGAGAGGAATAAGGTTTTGCAGGGCTTGTTGGGTTACATCCTCAGTGCAACCCAGGAGGCAGCTGTTGTTCCACCTTATGTTGCTTTTGCAGTAAGACCAAATCCTGGATTCTGGGAATATGTGAAAGTGAATGCAGATGACTTGCAGGTCGAGGGCATTGAGGTTTTAGAATACTTGAAGCTCAAGGAAACGATATTTGATGAAAACTGGGCAAACGATGAAAATGTTTTGGAGTTGGATTTTGGTGCTGTTGATTTCTCTGACCCTCGCTTggctctttcttcttctattggAAATGGACTGAACTATATCACCAAGTTCACAACCTCAAGGCTGAGTGGGGACTGCTCTGACAGTGCAAAGCCATTGCTTGATTACTTATTAGGCCTTAACCATCAAGGAGAGAAGCTGATGATCAATGACACTTTGAATACTTTAACCAAGCTTCGGAATGCGCTGAATGCAGCTGAAAAATATGTATCTGCACTCCCCAAAGACACACCATATCAGAATTTTGAGGAGAGGTTCAAGGAATGGGGATTTGAGAAAGGGTGGGGAAATACTGCAGAAAGGGTGAAGGAGACGATTAGAACACTTTCTGAGGTATTGGAATCAGCAGACCCAGCGAAGTTGGAATTGCTATTTAGCAGGCTTCCAAATATATTCAACATAGTTATTTTCTCTGTCCATGGCTACTTTGGCCAAGAAAATGTCCTTGGATTGCCTGATACGGGAGGCCAGGTGGTTTACATTCTTGATCAAGTGAGGGCTCTAGAGGAAGAACTACTCCATAGAATTAAATTGCAAGGCCTTAATGTGAAGCCCCAGATCCTTGTGCTTACACGCCTTATACCAGATGCCAAGGGAACAAAGTGTGATCAAGAATTGGAACCTATCATCAATACCAAGCATTCTCACATTCTTAGAGTCCCATTCTGGACAGAGAATGGAGTTCTTCGTCAATGGGTTTCGCGTTTTGATATATACCCTTACCTAGAGAGATATACCCAGGATGCTACTACCAAGATTCTTGAACTCATGGATGGGAAGCCTGACCTTATCATTGGAAATTACACTGATGGAAACTTGGTGGCATCTCTAATGGCTAGCAAGCTTGGAATAACTCAGGCAACTATAGCTCATGCTTTGGAGAAGACTAAATATGAAGATTCAGATGCAAAATGGAAGCAGTTTGATCCAAAGTACCACTTTTCATGTCAGTTCACTGCTGATATGATCGCGATGAATGCAGCCGATTTCATCATAACTAGCACATTCCAAGAGATTGCTGGAAGCAAGGATAGGCCTGGACAGTATGAAAGCCACATTGCATTCACCATGCCAGGACTTTGCCGTTATGTCTCAGGCATCAATGTCTTCGATCCAAAGTTCAATATCGCTGCCCCTGGAGCAGATCAATCTGTATACTTCCCTCACACAGAGAAACAACAGAGGTTGACACAATTTCATCCTGCCATTGAAGAACTACTTTATagtaataatgaaaatgatgatcaCATAGGGTTTTTGGCAGACAGGAAGAAACCCATCATCTTCTCAATGGCAAGGCTTGATACAGTGAAGAACATGACTGGCCTAGTTGAGTGGTATGGGAAGAACAAGAGGCTGAGGAATTTGGTGAATCTTGTGATTGTTGGAGGATTCTTTGACCCATCAAAATCTAAAGACAGGGAAGAAATTGCAGAAATCAACAAGATGCATGCCTTGATAAGGGAATACCAACTCAAGGGTCAGTTCAGATGGATAGCTGCACAAACTGATCGCTACCGAAATGGCGAGCTCTACCGCTGCATTGCAGACACAAAGGGAGCTTTTGTGCAGCCAGCATTGTATGAAGCTTTTGGTCTCACAGTCATAGAGGCAATGAACTGTGGTTTGCCCACTTTTGCAACAAATCAAGGTGGCCCAGCAGAGATTATAGTTGATGGGGTCTCTGGTTTTCACATTGATCCCTATAATGGAGATGAATCAAGCAACAAGATTGCTGACTTCTTTGAGAAGTGCAGAACTGATTCTGATTGTTGGAACAGAATGTCAAAAGGAGGTCTTCAGCGTATCAATGAATGCTACACATGGAAGATTTATGCAAACAAGGTGTTGAACATGAGTTCAGTTTATGGGTTTTGGAAAAGCTTGAATAAGGAACAAAAGTTAGCCAAGCAGAGATACATTCACATGTTCTATTCTCTTCAATTCAAGAACTTGGCAAAAAATGTGCCCATCCCACATGAGGCATCCCAGGAAACTTCAACAAAGGCAATAACTCCAAGCACTAAACCAATTCCATCAACACCAGGGAAACCATGGGAACCTTCTGGATTTCCTAAAACAGTTGCAGCACCCAAAACCCAAATAGCAGCAGGAACACCCAAGAAAGAATCTCAGACAACCTCAAGAGATGAAGCAGTTACAGGGAAGAGTTTGCTTGGCTCTAAAGAAAGGGGACGTGCGGGCTATGGATTCAATTGGTGGGTCTCCATAGTTTTTGTTGTGGCAATAATTTGttacttattaaatatttttgaccGTCTGATCTCATGGAAGAAGCGGCATCAGAGAGAATG 2765 0.4199 MASNFVLKRSDTIADSMPEALRQSRFHMKKCFARFVADGKRLMKRQEIMEDVEKSIEDKAERNKVLQGLLGYILSATQEAAVVPPYVAFAVRPNPGFWEYVKVNADDLQVEGIEVLEYLKLKETIFDENWANDENVLELDFGAVDFSDPRLALSSSIGNGLNYITKFTTSRLSGDCSDSAKPLLDYLLGLNHQGEKLMINDTLNTLTKLRNALNAAEKYVSALPKDTPYQNFEERFKEWGFEKGWGNTAERVKETIRTLSEVLESADPAKLELLFSRLPNIFNIVIFSVHGYFGQENVLGLPDTGGQVVYILDQVRALEEELLHRIKLQGLNVKPQILVLTRLIPDAKGTKCDQELEPIINTKHSHILRVPFWTENGVLRQWVSRFDIYPYLERYTQDATTKILELMDGKPDLIIGNYTDGNLVASLMASKLGITQATIAHALEKTKYEDSDAKWKQFDPKYHFSCQFTADMIAMNAADFIITSTFQEIAGSKDRPGQYESHIAFTMPGLCRYVSGINVFDPKFNIAAPGADQSVYFPHTEKQQRLTQFHPAIEELLYSNNENDDHIGFLADRKKPIIFSMARLDTVKNMTGLVEWYGKNKRLRNLVNLVIVGGFFDPSKSKDREEIAEINKMHALIREYQLKGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPYNGDESSNKIADFFEKCRTDSDCWNRMSKGGLQRINECYTWKIYANKVLNMSSVYGFWKSLNKEQKLAKQRYIHMFYSLQFKNLAKNVPIPHEASQETSTKAITPSTKPIPSTPGKPWEPSGFPKTVAAPKTQIAAGTPKKESQTTSRDEAVTGKSLLGSKERGRAGYGFNWWVSIVFVVAIICYLLNIFDRLISWKKRHQRE 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00957 921 PANTHER SUCROSE SYNTHASE 6 1 805 - -
Bva04g00957 921 Pfam Sucrose synthase 9 558 IPR000368 GO:0005985|GO:0016157
Bva04g00957 921 Pfam Glycosyl transferases group 1 569 734 IPR001296 GO:0016757
Bva04g00957 921 Gene3D Glycogen Phosphorylase B; 532 759 - -
Bva04g00957 921 MobiDBLite consensus disorder prediction 810 827 - -
Bva04g00957 921 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 300 768 - -
Bva04g00957 921 MobiDBLite consensus disorder prediction 810 871 - -
Bva04g00957 921 Gene3D Glycogen Phosphorylase B; 285 802 - -
Bva04g00957 921 Gene3D - 11 149 - -
Bva04g00957 921 PANTHER - 1 805 IPR012820 GO:0005985|GO:0016157
Bva04g00957 921 Gene3D - 150 280 - -
Bva04g00957 921 TIGRFAM sucr_synth: sucrose synthase 27 807 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00957 Bva-Chr4 6298412 6303414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00957 3 807 Glycosyltransferase AT4G02280 56.273 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00957 K00695 - gmx:100783965 1399.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00957 04 6298412 6303414 Bva04g00957 04 6298412 6303414 ECH