Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00886 ATGGCCGATCAGACCCCCAAACCAGAGCTCCTCGAGCTCAACAATGGATCCATGAATGTCATCATCACCAATTTAGGCTGCACAATCACTTCATTGTCCGTACCCGGCAAAGATGGAAAGCTGGCTGATGTTGTTCTTGGGTTCGACTCTGTTGAACCATATCAGAAAGGTCTTGCTCCGTACTTTGGCTGCATTGTGGGTCGGGTTGCAAACAGAATTAAAGAAGGGAAATTTACACTGGACGGGGTTCAATACTCTTTACCTGTCAACAAGCCCCCAAACAGTCTCCATGGTGGTCACATTGGGTTTGACAAGAAGGTGTGGCAGGTAGTTGAAGTTAAGAAAGGCGAAACCCCATCAATCACTTTTAAGTATCACAGCCCTGATGGGGAGGAAGGTTATCCCGGCGATATCACTGTTACTGCAACTTACACTCTCACCTCAAGCACCACTATGAGGCTTGACATGGAGGGAGTGCCAGGGAACAAGCCCACAATAATTAACTTGGCTCAGCATACATACTGGAACTTAGCTGGTCACAACTCGGGGAATATACATGACCATTCAATTCAGATATGGGCTAATCATTACACTCCTGTGGATCAGAATACTGTCCCAACCGGTGAAATCAAGCCTGTTAAGGACACGCCATTTGATTTTACATCCGAGAAGAGGATAGGTAACACCATTAATGAGGTTGGGATAGGTTATGACCACAATTATGTGCTTGATTgtggagaagagaaagatcGTTTGAAACGTGCTGTTAAGGTAAGGGATCCATCAAGTTCGAGGGTACTAAACTTGTGGACAAATGCCCCGGGTGTGCAATTTTACACTGGGAACTATGTTGATGGTATTTCTGGAAAAGGAGGCGCTGCATATGGAAAGCACGCAGGGCTGTGCCTGGAGACACAGGGATTCCCTAATGCCATAAACCAGCCAAATTTCCCATCCGTTGTTGTCCGACCGGGTGAGAAGTACCAACATTCCATGTTGTTTGAGTTTTCGGTTGAGTG 1019 0.4553 MADQTPKPELLELNNGSMNVIITNLGCTITSLSVPGKDGKLADVVLGFDSVEPYQKGLAPYFGCIVGRVANRIKEGKFTLDGVQYSLPVNKPPNSLHGGHIGFDKKVWQVVEVKKGETPSITFKYHSPDGEEGYPGDITVTATYTLTSSTTMRLDMEGVPGNKPTIINLAQHTYWNLAGHNSGNIHDHSIQIWANHYTPVDQNTVPTGEIKPVKDTPFDFTSEKRIGNTINEVGIGYDHNYVLDCGEEKDRLKRAVKVRDPSSSRVLNLWTNAPGVQFYTGNYVDGISGKGGAAYGKHAGLCLETQGFPNAINQPNFPSVVVRPGEKYQHSMLFEFSVE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00886 339 Gene3D - 2 339 IPR014718 GO:0030246
Bva04g00886 339 Pfam Aldose 1-epimerase 10 334 IPR008183 GO:0005975|GO:0016853
Bva04g00886 339 SUPERFAMILY Galactose mutarotase-like 9 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
Bva04g00886 339 PIRSF GALM 2 339 IPR015443 GO:0016853|GO:0019318
Bva04g00886 339 CDD galactose_mutarotase_like 14 336 - -
Bva04g00886 339 PANTHER ALDOSE-1-EPIMERASE 9 338 - -
Bva04g00886 339 PANTHER ALDOSE 1-EPIMERASE 9 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00886 Bva-Chr4 5842786 5845081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00886 7 337 Miscellaneous Gene Families AT3G47800 50.755 1.05e-107 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00886 K01785 - gmx:100776238 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00886 04 5842786 5845081 Bva04g00886 04 5842786 5845081 ECH