Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00882 ATGATCACATTATTGGACTTCTACCATGTTATGACTGCAATGGTGCCACTTTATGTGGCTATGATATTGGCCTATGGGTCAGTGAGATGGTGGAAGATTTTCTCCCCCGACCAATGCTCTGGAATCAACCGTTTTGTGGCTCTGTTTGCagttcctcttctttcttttcacttcATCGCTGCCAACAATCCCTATGAAATGAACATGAGGTTCATCGCTGCAGACACCCTCCAAAAGATCATCGTTTTAGTGATTCTAGCAATTTGGGCCAACTTCACCAAAAGGGGTTGCTTGGAATGGACAATaactctcttctctctttccacTCTGCCAAACACTTTGGTTATGGGTATCCCTTTGCTTAAAGGCATGTACGGAGAATTCTCAGGGAGCCTAATGGTCCAAATTGTGGTCCTCCAATGCATCATTTGGTACACTTTGATGCTCTTCCTGTTTGAGTTCAGGGGAGCCAGAATGCTTATCTCTGAGCAATTCCCGGGCACTGCTGGCTCCATTGTCTCCATCCACGTTGATTCCGATGTCATGTCATTGGATGGACGGCAACCGTTGGAAACCGAAGCTGAAATCAAAGAAGATGGGAAGCTCCATGTCACTGTGAGAAAATCCAATGCTTCAAGATCAGATATTTTCTCAAGAAGGTCTCAAGGGTTTTCTTCCACAACTCCTCGCCCTTCAAATCTCACCAATGCAGAGATTTACTCTCTGCAATCCTCTCGGAACCCAACTCCAAGAGGGTCCAGTTTCAATCACACAGATTTCTATTCTATGATGGCTGGGGGCAGAAATTCTAACTTTGGTGCCAATGATGTTTATGGGTTTTCAGCTTCAAGAGGGCCAACGCCAAGGCCAAGCAATTATGATGAAGACAGTGGTGCTGGTGGGAAGCCAAGGTTCCATCACCATTCTGGTGGAGCTGGGCAGTACCCTGCACCAAACACTGGAATGTTTTCCCCAACTGCATCCAAAAATGCTGCTCCTAATGCTAATGCTAAGAGGCCTAATGGTCAAGCAACACAGAAGCTAGAGGATGGGAGAGACCTTCACATGTATGTTTGGAGTTCAAGTGCTTCTCCTGTCTCCGATGTCTTTGGTGGCCATGAATATGGAGCTCATGATCAAAAAGAAGTCAAATTGACAGTGTCTCCAGGAAAAgTGGAGGGTCATAGAGATACCCAAGAGGATTACCTTGATAAGGATGAGTTCAGCTTTGGAAACAGAGGAATGGAGAGGGAAATGAACAACCATGAAGCTGAGAAAGTTGGAGATGACAAGCCAAAAACCATGCCTCCAGCAAGTGTAATGACAAGGCTTATATTGATAATGGTTTGGAGAAAGCTCATCAGAAACCCCAACACCTATTCTAGCCTCTTTGGCCTTACTTGGTCCCTTGTTTCATTCAAGTGGAATGTTGAAATGCCAGCCATTATAGCAAAATCTATTTCCATTCTGTCAGATGCAGGGCTTGGCATGGCCATGTTCAGTCTTGGTCTGTTTATGGCTTTGCAACCGAGGATCATAGCATGTGGAAATTCCATAGCAGCTTTTGCTATGGCCGTGAGATTCCTTGCAGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGCCTCAAAGGTGTTCTCTTGCACGTTGCTATTGTTCAGGCAGCCCTACCACAAGGAATCGTCCCCTTTGTCTTTGCCAAGGAATACAATGTCCACCCTGACATCCTCAGCACAGCTGTTATTTTTGGAATGCTAATTGCATTGCCCATAACGCTGGTGTACTACATCTTGATTGGGCTATG 1808 0.4458 MITLLDFYHVMTAMVPLYVAMILAYGSVRWWKIFSPDQCSGINRFVALFAVPLLSFHFIAANNPYEMNMRFIAADTLQKIIVLVILAIWANFTKRGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFLFEFRGARMLISEQFPGTAGSIVSIHVDSDVMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGFSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMAGGRNSNFGANDVYGFSASRGPTPRPSNYDEDSGAGGKPRFHHHSGGAGQYPAPNTGMFSPTASKNAAPNANAKRPNGQATQKLEDGRDLHMYVWSSSASPVSDVFGGHEYGAHDQKEVKLTVSPGKVEGHRDTQEDYLDKDEFSFGNRGMEREMNNHEAEKVGDDKPKTMPPASVMTRLILIMVWRKLIRNPNTYSSLFGLTWSLVSFKWNVEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFAMAVRFLAGPAVMAAASIAVGLKGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLVYYILIGL 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00882 602 TIGRFAM 2a69: auxin efflux carrier 1 602 IPR014024 -
Bva04g00882 602 MobiDBLite consensus disorder prediction 213 235 - -
Bva04g00882 602 MobiDBLite consensus disorder prediction 280 346 - -
Bva04g00882 602 Pfam Membrane transport protein 9 597 IPR004776 GO:0016021|GO:0055085
Bva04g00882 602 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 602 - -
Bva04g00882 602 MobiDBLite consensus disorder prediction 319 343 - -
Bva04g00882 602 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1A 1 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00882 Bva-Chr4 5811354 5815102 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00882 1 593 Organic Solute Cotransporters AT1G73590 72.800 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00882 K13947 - gmx:100499637 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00882 04 5811354 5815102 Bva04g00882 04 5811354 5815102 ECH