Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00880 ATGGCGGCGGCTGCTCAAGGTGTCGATGAGCGTCAGATGCAGAAGATTTACTGGATAGAGCACTCGGCGGATTTGTCCGTCGAGGCTATGATGCTTGACTCTAAAGCCGCAGATCTTGACAAGGAAGAGCGTCCTGAaGTACTCTCCCTGCTACCAGAAATTGAAGGAAAGTCAGTATTAGAACTAGGAGCAGGCATTGGAAGATTTACAGGTGGATTGGCTAAGAAGGCTGGTCAGTTACTGGCTGTGGACTTCATTGAGAGTGCCATAAAGAAGAATGAACAAATTAATGGGCACCACAAGAATGTCAAGTTTATGTGCGCTGATGTCACATCTCCAGACTTGCATATGTCTGAAGGATCAATTGATCTGATATTTTCCAATTGGTTACTTATGTATCTTTCAGATAAAGAGGTTGAAAATTTGGCAGAAAGGATGGTCAAATGGTTAAAAGATGatggatttatatttttcagagAATCTTGTTTCCACCAATCTGGAGACTCGAAGCGAAAATACAACCCAACTCACTATAGGGAACCCAGATATTACACCAAGGTATTCAAAGAATGCCATATGAATAATGGTTCTGGGAATTCCTTTGAGCTTTCTCTTGTTGGCTGTAAGTGCATTGGAGCTTATGTGCGAAATAAGAAGAATCAAAACCAGATTTGTTGGATTTGGCGAAAAGTTAGGTCACAAGACGATAGGGGGTTTCAGCGGTTCTTAGATAGCGTTGAGTATAATAATTACAGTATTACACTTTATGAACGTATTTACGGACAAGGCTTTGTGAGCACTGGAGGATCTGAAACTACAAAACAAATTGTGGCAAATTTAGATCTAAAGCCTGGTCAGAAAGTACTAGATGTTGGTTGTGGTACTGGGGGAGGTGACTTTTACATGGCTGAGAATTTTGATGTTGAAGTTGTTGGCATTGACCTCTCCATAAATATGATTTCTCTTGCTATCGAACGTGCAATTGGACTCAAATGTGCTGTTGAATTCGAATGTGCTGATTGCACTAAAAAAACTTACCCTGAGAACACATTTGATGTGATCTACTCCCGTGACTCCATGTTGCACATCCAAGACAAACTAACATTATTCAGATCATTCTATAAGTGGTTGAAGCCTGGAGGTAAACTTCTAATTACTGATTATTGCAAGAGTGCTGAAAGCCCGTCATTAGAATTCGCAGAGTACATTAAGGAAGGAGGATATCATCTCCATGACATGAAAGCATACAGCCAGATGCTCAAGAATGCTGGGTTTGATGACGTAACTGCTGATGATCAAACTAAACTGTTCTTAAAAAGTCTGCAGTGGGAGTTAAATGCCCTTGAGAAGGACAAGGACGGCTTTATTCAGGACTTCTCTGAGGAGGACTACAATAAATTTGTGGGAAGATGGAAAGCGAAGCAAACCAGGGGTGCATCTGGCGAGCAAATATGGGGCTTGTTCGTTGCCAAGAAAAATTG 1481 0.4092 MAAAAQGVDERQMQKIYWIEHSADLSVEAMMLDSKAADLDKEERPEVLSLLPEIEGKSVLELGAGIGRFTGGLAKKAGQLLAVDFIESAIKKNEQINGHHKNVKFMCADVTSPDLHMSEGSIDLIFSNWLLMYLSDKEVENLAERMVKWLKDDGFIFFRESCFHQSGDSKRKYNPTHYREPRYYTKVFKECHMNNGSGNSFELSLVGCKCIGAYVRNKKNQNQICWIWRKVRSQDDRGFQRFLDSVEYNNYSITLYERIYGQGFVSTGGSETTKQIVANLDLKPGQKVLDVGCGTGGGDFYMAENFDVEVVGIDLSINMISLAIERAIGLKCAVEFECADCTKKTYPENTFDVIYSRDSMLHIQDKLTLFRSFYKWLKPGGKLLITDYCKSAESPSLEFAEYIKEGGYHLHDMKAYSQMLKNAGFDDVTADDQTKLFLKSLQWELNALEKDKDGFIQDFSEEDYNKFVGRWKAKQTRGASGEQIWGLFVAKKN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00880 493 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 247 492 IPR029063 -
Bva04g00880 493 Gene3D Vaccinia Virus protein VP39 243 493 IPR029063 -
Bva04g00880 493 Pfam Methyltransferase domain 60 158 IPR013216 GO:0008168
Bva04g00880 493 Coils Coil 438 458 - -
Bva04g00880 493 CDD AdoMet_MTases 59 158 - -
Bva04g00880 493 Pfam Methyltransferase domain 277 429 - -
Bva04g00880 493 Gene3D Vaccinia Virus protein VP39 11 242 IPR029063 -
Bva04g00880 493 PANTHER PHOSPHOETHANOLAMINE N-METHYLTRANSFERASE 3 5 493 IPR025771 GO:0000234|GO:0006656
Bva04g00880 493 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 22 209 IPR029063 -
Bva04g00880 493 PANTHER PHOSPHOETHANOLAMINE METHYLTRANSFERASE 5 493 - -
Bva04g00880 493 CDD AdoMet_MTases 287 388 - -
Bva04g00880 493 ProSiteProfiles Phosphoethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.103) family profile. 1 493 IPR025771 GO:0000234|GO:0006656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00880 Bva-Chr4 5788148 5793226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00880 9 492 Acyl Lipid Metabolism Gene Families AT1G48600 74.793 0.0 770
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00880 K05929 - gmx:100818466 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00880 04 5788148 5793226 Bva03g00748 03 4467513 4471208 ECH
Bva04g00880 04 5788148 5793226 Bva04g00880 04 5788148 5793226 ECH