Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00860 ATGCTTTCTTTGAGGGATTTCTGGAGACGGCATAGGAGGAAGGTTTTCCTTACCGTTGGTGTTTTAGGAAGTGGGTACTTTCTGTGCAAGTTTTATAATGGTTACAGGCGTAGGCTCGATACACTGGAGAGAGAATTCACAGTTCAGAGGGAAAATGAGGAGCTCATTAAGGCTCAGATGCAAGCTCACTTTGAGAATATTCAAAGAATTTCTGATACAATGACGCTGCCTCATGCAATGTACAGCTTAAGTTGTCAGATAGCAGACGATTTGGATCTTTCACAACTTCTTGACAGgttaataaaaggaaagggTCAGCCAAACACTTTAACACCTTTGGAGAAACTAGAATCATGGGATAGACTCAAAATTCTAAGTTTTACAAGAATGGCATTGTCTGTGTGGGCAACAACAGTGCTTAGTTTATACATAAAAGTTCAAGTCAATATACTGGGAAGGCATCTATATATTGATACTGCAAGAAAGCTTGGAAGCCCTAATTCAATGGAGAGTGGAGATGCATTTGATAGGGAAGACCAGCAGAAATTTCTAGGGAACGtggattttctttctcaatatGGTTTGCCTACATTGATTTCTGATATGGAGGCAGCAACAAAAGAAGTTCTGAAAGGAAAGCAGTTAAGAGATTTCTTCAACTATACAACACTCTGCGAAACTATCATGCAAATACTTGATACATTCATGAGCATGGGAAGTCCCCATCACTGGATAAAGTACATGATGCCCGAGGATGTTAAATTGCATACATCATCCTCCAGCAGTGAAGGTCTTCTACATTCTGATATGACTGAATTTGATCAACTCATGGTGGAGGCACGATCAGTGTTATCAAGTTCTGAATTTGGGAACATTATTAAGATATCTTTGAAAACAGTGGTGGAGAATATGGGGGCTAAATTTAGGGAAGCAAGTCTGGCTTCAGACATGCCGCTGGCTAAAGTGTTGCCTCAAGTGGCACTGATGTGTCCTTTGCTTCTTGAAGAACCCAGCAAAAATCAGTTCATCCAAGtcattaaatatatacctGAGGTTGAACTTTTTTTCACTCTCCTCTATTCAAATATGCCAAGTGCATA 1100 0.3855 MLSLRDFWRRHRRKVFLTVGVLGSGYFLCKFYNGYRRRLDTLEREFTVQRENEELIKAQMQAHFENIQRISDTMTLPHAMYSLSCQIADDLDLSQLLDRLIKGKGQPNTLTPLEKLESWDRLKILSFTRMALSVWATTVLSLYIKVQVNILGRHLYIDTARKLGSPNSMESGDAFDREDQQKFLGNVDFLSQYGLPTLISDMEAATKEVLKGKQLRDFFNYTTLCETIMQILDTFMSMGSPHHWIKYMMPEDVKLHTSSSSSEGLLHSDMTEFDQLMVEARSVLSSSEFGNIIKISLKTVVENMGAKFREASLASDMPLAKVLPQVALMCPLLLEEPSKNQFIQVIKYIPEVELFFTLLYSNMPSA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00860 366 Coils Coil 32 52 - -
Bva04g00860 366 PANTHER PEROXISOMAL BIOGENESIS FACTOR 3 6 364 IPR006966 GO:0005779|GO:0007031
Bva04g00860 366 Pfam Peroxin-3 111 362 IPR006966 GO:0005779|GO:0007031
Bva04g00860 366 PANTHER PEROXISOME BIOGENESIS PROTEIN 3-2-LIKE 6 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00860 Bva-Chr4 5643253 5649199 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00860 K13336 - gmx:100782816 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00860 04 5643253 5649199 Bva04g00860 04 5643253 5649199 ECH