Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00858 ATGGCGGATCAGAACAACGGCGAAATCCTTATGCTCGAAGGTCCACGTTCGTATGCGCGGCCTAGTGCTTCTGACGCTGAAATTATCGATGCGTTGCCTTACATTGATGGCGACTATAACGACCCCAGGGTCAAGTTTGAGGTTGACCGTTTAGTCGAGGAAGAGATGCGCCGCAGCTCTAAAAGGCCCGCTGATTTTCTCAAAGATTTACCTCCGGTGCCCAAGTTCAGTTTTGAGGATTACCCAATGGTTACCAGAGAGTATGAACGCGTAAGAGCTGGAAGGCCTCCTGCTCCTCTTGATAGGTCACGATACGAATTAGAAATGCCGCCAATGAATAAAAGGAATGATGAAACCGCATGGAGACAGTCGCTCCAAAGAAATCAACGGTTACTACAGTATCAGATGATCAGGATGgaaaatttggatttgttgTTAAAATATGGCCCTGATGCTTGGAAGCTGCACAACCAACGATTGGAAGTATGCTTATCAAGACTGCAGAAATTAGCTCAAGAACAGAATGAACAGATTGAAAAAGTCAATCGTGAGAGGAAATATCATCAGCAAAATACTGCATATGAGCTTAATGCTTTGTCCACACAATGGAAGGAGCTTTGTCAGAAAAATATAGACATCCATGCAGCATGTACTTTAATTGAAAATCAGTTAAATGAACTGAGAGCAGAAGCAGCAGCAAGaGGCTGGAACTTGGAAGCTCTGACAGAAAATGGCCCGTCATCACATTCAGAATTATG 758 0.4327 MADQNNGEILMLEGPRSYARPSASDAEIIDALPYIDGDYNDPRVKFEVDRLVEEEMRRSSKRPADFLKDLPPVPKFSFEDYPMVTREYERVRAGRPPAPLDRSRYELEMPPMNKRNDETAWRQSLQRNQRLLQYQMIRMENLDLLLKYGPDAWKLHNQRLEVCLSRLQKLAQEQNEQIEKVNRERKYHQQNTAYELNALSTQWKELCQKNIDIHAACTLIENQLNELRAEAAARGWNLEALTENGPSSHSEL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00858 252 Coils Coil 157 191 - -
Bva04g00858 252 PANTHER PRE-MRNA-SPLICING FACTOR SPF27 22 235 - -
Bva04g00858 252 PANTHER BCAS2 PROTEIN 22 235 IPR008409 GO:0006397
Bva04g00858 252 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 27 232 IPR008409 GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00858 Bva-Chr4 5638493 5642606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00858 K12861 - gmx:100777152 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00858 04 5638493 5642606 Bva04g00858 04 5638493 5642606 ECH