Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00843 ATGTCTCTTGGCTTTTCAGGaaaaaacaaaatgctaCTTAGCCGGATTGGGTTCGGTTGCGTCGACCCGCTTCGACCCGACCGGAGAGAGGGAAACCGGAGCTTCTCGCGCTTAACCGGCCAGTGGGTGTCGGCGCCGTTGCCGGAGAGGGCATTCCTCGGTGTGATTTCAGAGAGGAAGAACGATAAGCGGCAATCTATATGCACCGCCGATGAACTTCACTATGTCTCTGTTCCCAACTCTGATTGGAAGCTCGCTCTCTGGCGCTACCTACCTTCGCCTGTGGCACCAACTAGAAATCACCCACTTTTACTACTGTCAGGGGTTGCAACCAATGCTGTTGGTTATGATCTCTCTCCTCAGGCTTCATTTGCTCGCTATATGTCTGCCCAAGGATTTGATACATGGACTCTTGAAGTTCGAGGTGCTGGGTTGAGCACAAATGGAGTTAGCTTGATGGAAGATAAGCAATACCTCAGCAATTTAGCCGGGATAGATTCTGCACTCAAGCAAGATTCTACTTACACCAAAGGGAAAGGGTTAGGGATGATGGAGACTCTTACCAGATTATCAGATAGATTGTCAGACTTTCTTAGTGGGGACTTGTTGGAAGCTGGGCGAAACTCTTCAATTGCAAGTCAAATCAGTGATTTGAATCGAAGGCTTCAAACTATTATTGAAGAGGCTCAACGGTTATTGTTCCCAAGACAGGTTTTGAACTTGCAAGAGCTTTTATCTGCTGCTCAAGAAGAATTTCAGAAACTCAAGTACGATTGGGACTTTGACCATTATCTGGAAGAGGATGTACCAGCTGCGATGGAATACATAAGAACTCAAAGCCAATCCAAGGATGGAAAGTTACTTGCAATTGGCCACTCAATGGGGGGTATCTTGTTATATGCAATGCTCTCACGTTGTTGTTTTGATGGAAAAGATTCTGGGTTGGCATCAATTGTTACCTTGGCATCATCACTCGACTACACACCTTCAAGATCATCTCTGAAGTTGCTTTTACCGCTGGCACAACCTGCTCAAGCTCTCAACGTTCCTGTTATTCCAGTTGGGCCATTGATTTCTATTGCTTATCCTCTCGCAAATTATCCTCCCTATGTTTTATCATGGCTGAAGGATCAGATTACAGCTCGTGACATGATGGATCAAGAGCTGCTTGAAAAACTAGCTTTCAACAACTTCTGTACCGTACCTTCTAAGCTTCTCTTGCAGTTAACAACAGCCTTCAATAAGGGCGGTTTACGTGACAGGAGTGgatctttcttttataaggACCATCTCCATAAAAGTAATGTACCTATTTTGGCGCTTGCCGGTGACCAAGATCTGATTTGTCCCCCTGAAGCTGTATACGCAGAAACAGTGAAGCTCATTCCTGAGAACTTGGTTACTTACAAAGTTTTTGGGGAGCCTGGTGGTCCCCACTATGCCCACTATGACTTGGTAGGAGGCCGTTTGGCAGCAGATGAGGTATATCCATGTATAACTGAGTTTCTCTTTCATCATGACATGGCTTA 1529 0.4493 MSLGFSGKNKMLLSRIGFGCVDPLRPDRREGNRSFSRLTGQWVSAPLPERAFLGVISERKNDKRQSICTADELHYVSVPNSDWKLALWRYLPSPVAPTRNHPLLLLSGVATNAVGYDLSPQASFARYMSAQGFDTWTLEVRGAGLSTNGVSLMEDKQYLSNLAGIDSALKQDSTYTKGKGLGMMETLTRLSDRLSDFLSGDLLEAGRNSSIASQISDLNRRLQTIIEEAQRLLFPRQVLNLQELLSAAQEEFQKLKYDWDFDHYLEEDVPAAMEYIRTQSQSKDGKLLAIGHSMGGILLYAMLSRCCFDGKDSGLASIVTLASSLDYTPSRSSLKLLLPLAQPAQALNVPVIPVGPLISIAYPLANYPPYVLSWLKDQITARDMMDQELLEKLAFNNFCTVPSKLLLQLTTAFNKGGLRDRSGSFFYKDHLHKSNVPILALAGDQDLICPPEAVYETVKLIPENLVTYKVFGEPGGPHYAHYDLAADEVYPCITEFLFHHDMA 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00843 503 Coils Coil 238 258 - -
Bva04g00843 503 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 49 500 - -
Bva04g00843 503 PANTHER LYSOSOMAL ACID LIPASE-RELATED 49 500 - -
Bva04g00843 503 ProSitePatterns Prolyl endopeptidase family serine active site. 268 298 IPR002471 GO:0004252|GO:0006508
Bva04g00843 503 PIRSF UCP031088_abhydr 181 503 IPR016969 -
Bva04g00843 503 PIRSF UCP031088_abhydr 32 201 IPR016969 -
Bva04g00843 503 Gene3D alpha/beta hydrolase 72 172 IPR029058 -
Bva04g00843 503 Gene3D alpha/beta hydrolase 242 498 IPR029058 -
Bva04g00843 503 SUPERFAMILY alpha/beta-Hydrolases 73 497 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00843 Bva-Chr4 5537857 5541287 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00843 - - gmx:100808317 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00843 04 5537857 5541287 Bva04g00843 04 5537857 5541287 ECH