Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00837 ATGAAGGTAGCACACATTGCACTGTGCACTCTGCTGATCCTGCTTGTGGCTCAAGTGCAAGTGTCCATGGCAGTAACATGCGCCCCAGTACAGCTGAGTCCATGTGTGAGTGCAATGACATCTGCAGCTCCTCCAACAAAACTGTGTTGCTCCAAGATTAAGGAACAAAGACCCTGCCTCTGCCAATACCTTAAGAATCCCATGCTCAAGAAATACGTTGACTCTCCCAATGCCAGGAAAGTTGCTAAAACTTGTGGCACTCCCTTCCCAAGATGCTG 278 0.4892 MKVAHIALCTLLILLVAQVQVSMAVTCAPVQLSPCVSAMTSAAPPTKLCCSKIKEQRPCLCQYLKNPMLKKYVDSPNARKVAKTCGTPFPRC 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00837 92 Pfam Probable lipid transfer 23 87 IPR016140 -
Bva04g00837 92 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 92 IPR036312 -
Bva04g00837 92 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 2 92 - -
Bva04g00837 92 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 2 92 IPR033872 GO:0006869
Bva04g00837 92 Gene3D - 25 92 IPR036312 -
Bva04g00837 92 CDD nsLTP2 27 92 IPR033872 GO:0006869
Bva04g00837 92 SMART aai_6 27 92 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00837 Bva-Chr4 5510004 5510282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00837 3 92 Acyl Lipid Metabolism Gene Families AT3G18280 54.444 8.07e-33 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00837 - - jre:109010671 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00837 04 5510004 5510282 Bva03g00691 03 4135085 4135363 ECH
Bva04g00837 04 5510004 5510282 Bva04g00837 04 5510004 5510282 ECH