Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00828 ATGGCGGGCTCTTCGATTATGGATAATCTCTTCCAACGCACTTTGGATGATTTGATCAAAGGCTTCCGCCAGCAACTCATTGGCGAGTCGGCCTTCATCTCAAAGAACATGGAGGAGATTCGCCGCGAGATCAAGTCTACCGATCCCCACACAAAGTCCACAGCTCTTCAGAAGCTGTCTTACCTCAGTGCCATTTACGGCGTCGACATGTCTTGGGCTGCGTTTCATGTCGTCGAGGTTATGTCCTCTTCGAGCTTTGCCCACAAGAAGATCGGGTACCAAGCAGCCTCGCAGTCCTTCCACGATGGTACCTCTGTTATACTTCTCATCACTAACCAGCTCCGCAAAGATCTTTCTAGTCCTAACGAGTTCGAGGTGAGTCTTGCCCTTGAATGCTTATCCCGAATTGCCACCGTTGATCTAGCTAGAGATTTAAACCCCGAGTTGTTCACTTTACTGGGTACTAGTAAGGTTTTTGTTAGAAAGAAAGCAATTGGTGTAATTTTGAGGGTTTTTGAGAAATACTCAGACTCCGTCAGGGTATGTTTTAAGCGTTTGGTTGAGAATTTAGAGAGTTCGGATCCCCAAATTGTCACTGCTGTGGTTGGGGTCTTTTGTGAGCTAGCTTCAAAAGATCCAAGATCATATCTTCCTTTGGCGCCTGAGTTCTATAAGATTTTGGTTAATTCCAGGAATAACTGGGTTCTAATTAAGATACTGAAAGTATTTGGCAAATTGGCACCATTGGAACCCAGGTTGGCCAAAAAGATTATTGAACCCATTTGTGAACATATCAGAAGAACTGGAGCAAAGTCTTTGATGTTTGAATGCATTAGGACGGTGGTTACTAGCTTGAGTGATCATGAGTCTGCATTTAAGCTGTCAGTTTCAAAGATTCGGGAGTTGCTGGTTGATGATGATCCAAATCTTAGATATCTTGGACTGCAAGCACTTTCAGTTGTTGCACCAAAGCACTTGTGGGCAGTCTTGGAGAATAAGGAAGCTGTAATTAAGTCATTGAGCGATGAAGatactaatataaaatttgagtcTTTGCATCTTATGATGGCTATGGTTTCTGAGAGCAATGTGGCAGAAATCTCCAGGGTGTTAGTCAATTATGCCTTAAAATCTGACCCTGAATTTTGCAATGAGATTCTGGCTTCCATTTTGTCTACATGTAGTAGAAATGTATATGAGATCATTATTGACTTTGATTGGTATGTATCACTTCTTGGCGAAATGTTAAGGATTCCAAATTGCCAAAAAGGTGAAGAAATTGAGAACCAGCTTATTGATATTGGCATGAGAGTTAGGGATGCTAGATTGGAGCTTGTCCGGGTTAGTCGTGGTCTTTTGATTGACCCTGCATTACTTGGTAATGTGCACTTGTATAGGATATTATGTGCTGCTGCTTGGGTCGCAGGGGAATATGTTGAGGTTGCGGGCAATCCATTTGAACTCATGGATGCACTCCTACAACCCCGTACCAATCTTTTGCCACCATCTATAAGGGCAGTTTATATTCTTTCtgcttttaaagttttaatcttttgtTTGGATTCTTACCTtctgcaaaatgaaaatactgCATTCTCATATAATGGTGATTTAGCTGGGGTAGGTTCACAGTTGGTAGTTGGAAAGAAATGCACACAGGCTTCTGATTTGGCGACATGTGAAAGTTATGAACAGGACAAGGGTTTCAGCCCACAGATTACAActgatttttctgaaaatattaCTCTTGAAAACAATGTGGATGGAATTGTTCCTCAAGGGCAGACGTCTACGGCTACATTGTTGGAGAAGAACAATTTCACCCACGAATCTATTGTTTGCCTACTAAGTTTAGTTGAATTGGTTTTGGGCCCCTTGACAGCAAATGAGGATGTGGAAGTCCTTGAAAGAGCACGCAATGTACTTTCTTTTGTTCAGTTGATTAGAGCtgaaatatctaataattcaGTTCTGAATGTggagaacaagaaagatgctcaattttcaaacataatgAGATTAATACAAGATGCTTTCTCTGAAGAACTTGGCCCAGTCTCAACAAGTGCACAGGGAAGAGTTGCTGTACCAGATGGGTTAGTTCTTCTGGAGAATCTTGATGACTTGAAAACAATATGTGGTGATATTGAACTGCCTTCGTCCAGTTCATTTAACTTAGCAGACCCTCATTATGGAAGTACTTATGATGcttcttcatctattttgaAGAATGAAGACTCAGGGCCATCAAATGAATCTACATCTCTGCTTGAACACCGTAAGCGGCATGGGTTATATTACCTTCCTTCGGAGAAAAACGAGATTGTTCCAGATGATTATCCTCCTGCCCGTGAACTTGAGGTGAAGAGTAACATAAATGATGACACTGAATATCTAGCCAAGCTGACAGAGCAATCGCTAGTTTTGAAGAAAAGGCCGAATCAACTGAAGCCCAGGCCTGTAGTGGTAAAATTAGATGATGGAGACGTGGCACCAGTTTTAGTCAAGAAGTCAGAGCCAGGGGAGGATTCACTTTCTGGTGCTGTGAGAGACATTCTGTTAGGTAGTGAAACAAGGCCAAGTTCATCTAGAAGTAATCCTTCTGACCGCTCATCTGGCAAgaggaaagacaaaatgaaacTAAGCACAGATCTTCCgtttgaaatcaaagaaaatttggcTGATGAAGAAAAGTCTGACCTTGAAAATCCAAACTCAAGGACCAAACACCGTAGTCAtaacaaagagagaagaaggagaagtCCAGGCAAGACTGGTGAAGGAGCAGAACATGATCAGAGGGGGAAGACAAAGAGTAGTCATCGCCATAGTAGGCATAAAGCTCGTCATAGAGCCAATTCACCATTGAATGTCGTTTCACAAACACCAGTAATTCCAGATTTTCTGTTGTA 2912 0.3953 MAGSSIMDNLFQRTLDDLIKGFRQQLIGESAFISKNMEEIRREIKSTDPHTKSTALQKLSYLSAIYGVDMSWAAFHVVEVMSSSSFAHKKIGYQAASQSFHDGTSVILLITNQLRKDLSSPNEFEVSLALECLSRIATVDLARDLNPELFTLLGTSKVFVRKKAIGVILRVFEKYSDSVRVCFKRLVENLESSDPQIVTAVVGVFCELASKDPRSYLPLAPEFYKILVNSRNNWVLIKILKVFGKLAPLEPRLAKKIIEPICEHIRRTGAKSLMFECIRTVVTSLSDHESAFKLSVSKIRELLVDDDPNLRYLGLQALSVVAPKHLWAVLENKEAVIKSLSDEDTNIKFESLHLMMAMVSESNVAEISRVLVNYALKSDPEFCNEILASILSTCSRNVYEIIIDFDWYVSLLGEMLRIPNCQKGEEIENQLIDIGMRVRDARLELVRVSRGLLIDPALLGNVHLYRILCAAAWVAGEYVEVAGNPFELMDALLQPRTNLLPPSIRAVYILSAFKVLIFCLDSYLLQNENTAFSYNGDLAGVGSQLVVGKKCTQASDLATCESYEQDKGFSPQITTDFSENITLENNVDGIVPQGQTSTATLLEKNNFTHESIVCLLSLVELVLGPLTANEDVEVLERARNVLSFVQLIRAEISNNSVLNVENKKDAQFSNIMRLIQDAFSEELGPVSTSAQGRVAVPDGLVLLENLDDLKTICGDIELPSSSSFNLADPHYGSTYDASSSILKNEDSGPSNESTSLLEHRKRHGLYYLPSEKNEIVPDDYPPARELEVKSNINDDTEYLAKLTEQSLVLKKRPNQLKPRPVVVKLDDGDVAPVLVKKSEPGEDSLSGAVRDILLGSETRPSSSRSNPSDRSSGKRKDKMKLSTDLPFEIKENLADEEKSDLENPNSRTKHRSHNKERRRRSPGKTGEGAEHDQRGKTKSSHRHSRHKARHRANSPLNVVSQTPVIPDFLL 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00828 970 SUPERFAMILY ARM repeat 30 645 IPR016024 -
Bva04g00828 970 PANTHER DELTA ADAPTIN-RELATED 3 969 IPR017105 GO:0015031|GO:0030123
Bva04g00828 970 Gene3D - 4 556 IPR011989 -
Bva04g00828 970 MobiDBLite consensus disorder prediction 738 754 - -
Bva04g00828 970 MobiDBLite consensus disorder prediction 938 952 - -
Bva04g00828 970 PIRSF AP3_delta 1 964 IPR017105 GO:0015031|GO:0030123
Bva04g00828 970 MobiDBLite consensus disorder prediction 869 909 - -
Bva04g00828 970 MobiDBLite consensus disorder prediction 854 970 - -
Bva04g00828 970 MobiDBLite consensus disorder prediction 920 937 - -
Bva04g00828 970 Pfam Adaptin N terminal region 30 484 IPR002553 GO:0006886|GO:0016192|GO:0030117
Bva04g00828 970 MobiDBLite consensus disorder prediction 738 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00828 Bva-Chr4 5462585 5465936 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00828 K12396 - gmx:100815221 1350.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00828 04 5462585 5465936 Bva04g00828 04 5462585 5465936 ECH