Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00817 ATGAGTAGAAAGAAGAGTTTCCTTTTTAATGTTAAGAAGGAGGCAGTGGAATTCTTGAGCCATCTCCGGGAGGAGAAGCCCGGGATTCCGATTTTTGTTCCTGTGGTTTTGATTGCTTGGGCTATTGAGAAATGGGTATTCTCTCTTTCCAATTGGGTTCTGCTTGGAGTTGCTATATGGGCTACTATACAGTATGGTAATTATCAAAGCAAACTACTTGTGGAGGACTTGGATAAGAAATGGAAGCGAGTCATTCTGAACACTTCGCCTATCACACCATTGGAGCACTGTGAGTGGCTGAATAAGCTGTTAACGGAAGTTTGGCCCAACTATTTTAACCCGAAGCTGTCTATTAGACTCTCAGCCATGGTTGAGAAACGCTTAAAGCTCCGAAAACCAAGACTTATAGAAAAAGTTGAGCTACAGGAGATTTCACTTGGATCATGCCCTCCTAGCTTGGGACTTCAAGGGATGCGATGGTTAACCTATTGTGATAAGCGAGTCCTGCAACTGGGTTTTGATTGGGACACAAATGATATGAGTATTTTGATGCTTGCAAAGATTTCCAGGCCATTTACTGGAACTGCCCGGATTGTGATTAACAGCCTTCATATCAAGGGTGATCTTCTCTTGATCCCTATTCTAGATGGTAAGGcgattttgttttcatttgtatCAACCCCTGAGGTGAGAATAGGAGTTGCCTTTGGAAGTGGTGGAAGCCAATCACTACCAGCCACTGAGTTACCTGGTGTTTCTTCTTGGCTGGTTAAACTTTTTACAGACACATTGGTGAAAACAATGGTGGAACCTCGGCGCCGTTGTTTCTCTTTACCTGCAGTGAGTTTAAAGAAACATGTTGCTGGAGGCATTGTATACGTGAGAGTAATTTCAGCAAAAAAACTTTCTAGGAGAAGCTTCAGGTTCAGCCCATCTAGGAGGCAACAAAATAGTACAAATGATAGCTATTTAGAGGATAACGTGAATGACAAGGAACTACAGACATTTGTGGAGGTAGAGCTTGAAGAATTAAGCAGGAGAACAGATGTGAGACTAGGTTCAACTCCAAGATGGGATGCAACCTTTAATATGGTTTTACATGATAGTGCTGGAAGTATTCGTTTCAGCCTTTATGAGTGTCTTCCCAACAGTTTGAAGTATGACAATCTAGGAAGTTGTGAAATCAAGATGAGGTACGTTGAAGATGACTCCACCATATTTTGGGCAATAGGACCTGATTCTGGTGTCATAGCAAAGCATGCCAAGTTTTGTGGAGATGAAGTTGAACTGACTGTTCCATTTGAGGGGGTTAACTCAGCGGAGttgACGGTGAAAATTGTAGTGAAAGAGTGGCAATTTGCTGATGGTTCACGTAGCTTGAACAACCTCCGCATTAACTCTCAGAGATCACTTAATGGGTTATCAAATCTTCTGTCAGGAACTGGAAGGAAACTTAATATAACAGTTGTGGAAGCAAAGGATCTTATAAAGGACAAATCTGGAAAAGTTGACCCATATATGAAATTGCAGTACGGAAAGGTTGTCCAGAGAACAAAGACAGCTCATACTGTAAATCCTGTCTGGAATCAGAggtttgaatttgatgaaattgGAGATGGTGAATACCTAAACGTAAATTGTTTTACTGAAGAAACTTTTGGAGATGAAAACATTGGCAGTGCAAATGTCAGTCTGGAAGGACTAAAAGAGGGGTTGGTCAAGGATGTGTGGATCCCTCTTGAAAAAGTCAGTTCAGGAGAATTAAGACTTAGAATAGAAGCAGTTAGGGTAGATGACCAAGAACGATCAATGGGCTCAGGCAATGGTTTGGTAGAACTTGTTGTGGTTGAAGCAAAGGATCTAATTGGCGCTGATTTCAGAGGGACAAGTGATCCATATGTGAGGATGCAGTATGGAAACTTGAAGAGAAGGACAAAGGTTATGCACAAAACTCTTAATCCCAGATGGAACCAGACATTTGAGTTCCCTGAGGATGGCAGCCCCCTGGTACTCTATGTTAAGGACTATAATTCCTTACTTCCCACATCAAGTCTAGGCGAATGCACAGTGGAGTATCGAAGCCTGCCTCCAAACCAGGCAGCTGACAAATGGATACCTCTGCAAGGAGTTAAAAGAGGGGAAATCCATGTCCAAATCACGAGAAAAGTTCCAGAGATGCAAAAGAAACCTAGTCGTCTACATTCTGAACCTTCCTTAAATAAATTGCATCAAATCCCTGGCCAGATAAAACAACTCATGGTCAAGTTTCGATCTTTAATAGAAGATGGAAATCTTGAAGGACTCTCTACCACTTTGAGTGAGCTTGAAACTCTCAAGGATACTCAGGAAGAGTATATAAACCAGCTGGAGACTGATCAAATGCTTCTTCTCAGCAAAATAAAGGAACTGGGTGAGGAGATTATTAATTCTTCGCCTTCTCTCAACAGAGAACCCCCAAAAAATTCTTTCCGGAAGCCGCATCGCTCACAGTCCATACATGGATA 2504 0.4137 MSRKKSFLFNVKKEAVEFLSHLREEKPGIPIFVPVVLIAWAIEKWVFSLSNWVLLGVAIWATIQYGNYQSKLLVEDLDKKWKRVILNTSPITPLEHCEWLNKLLTEVWPNYFNPKLSIRLSAMVEKRLKLRKPRLIEKVELQEISLGSCPPSLGLQGMRWLTYCDKRVLQLGFDWDTNDMSILMLAKISRPFTGTARIVINSLHIKGDLLLIPILDGKAILFSFVSTPEVRIGVAFGSGGSQSLPATELPGVSSWLVKLFTDTLVKTMVEPRRRCFSLPAVSLKKHVAGGIVYVRVISAKKLSRRSFRFSPSRRQQNSTNDSYLEDNVNDKELQTFVEVELEELSRRTDVRLGSTPRWDATFNMVLHDSAGSIRFSLYECLPNSLKYDNLGSCEIKMRYVEDDSTIFWAIGPDSGVIAKHAKFCGDEVELTVPFEGVNSAELTVKIVVKEWQFADGSRSLNNLRINSQRSLNGLSNLLSGTGRKLNITVVEAKDLIKDKSGKVDPYMKLQYGKVVQRTKTAHTVNPVWNQRFEFDEIGDGEYLNVNCFTEETFGDENIGSANVSLEGLKEGLVKDVWIPLEKVSSGELRLRIEAVRVDDQERSMGSGNGLVELVVVEAKDLIGADFRGTSDPYVRMQYGNLKRRTKVMHKTLNPRWNQTFEFPEDGSPLVLYVKDYNSLLPTSSLGECTVEYRSLPPNQAADKWIPLQGVKRGEIHVQITRKVPEMQKKPSRLHSEPSLNKLHQIPGQIKQLMVKFRSLIEDGNLEGLSTTLSELETLKDTQEEYINQLETDQMLLLSKIKELGEEIINSSPSLNREPPKNSFRKPHRSQSIHG 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00817 834 ProSiteProfiles C2 domain profile. 466 578 IPR000008 -
Bva04g00817 834 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 484 593 IPR035892 -
Bva04g00817 834 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 93 279 IPR031468 GO:0008289
Bva04g00817 834 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 607 720 IPR035892 -
Bva04g00817 834 ProSiteProfiles C2 domain profile. 270 410 IPR000008 -
Bva04g00817 834 Pfam C2 domain 484 580 IPR000008 -
Bva04g00817 834 Pfam C2 domain 610 707 IPR000008 -
Bva04g00817 834 Pfam C2 domain 291 401 IPR000008 -
Bva04g00817 834 ProSiteProfiles C2 domain profile. 591 705 IPR000008 -
Bva04g00817 834 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 290 405 IPR035892 -
Bva04g00817 834 MobiDBLite consensus disorder prediction 810 834 - -
Bva04g00817 834 Gene3D C2 domain 280 408 IPR035892 -
Bva04g00817 834 PANTHER OS01G0128800 PROTEIN 2 815 - -
Bva04g00817 834 PANTHER PLANT SYNAPTOTAGMIN 2 815 - -
Bva04g00817 834 CDD C2 611 707 - -
Bva04g00817 834 Coils Coil 772 806 - -
Bva04g00817 834 Gene3D C2 domain 597 722 IPR035892 -
Bva04g00817 834 Gene3D C2 domain 474 596 IPR035892 -
Bva04g00817 834 SMART C2_3c 484 577 IPR000008 -
Bva04g00817 834 SMART C2_3c 610 704 IPR000008 -
Bva04g00817 834 SMART C2_3c 291 409 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00817 Bva-Chr4 5393876 5400214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00817 328 752 Lipid Metabolism Gene Families AT4G20080 23.577 1.21e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00817 - - gmx:100807475 1216.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00817 04 5393876 5400214 Bva04g00817 04 5393876 5400214 ECH