Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00816 ATGCCACACGCAGAGCTCATTTCATCCAAAATGGCGTTTACCACTGCTAAATTAACAGAATTGCCTCTCAAAACTTCTCTCCCTCTCAGCTCTCACACTTCTACTCTCAACCTCGTCTTCTCTCATCCCAAGTTATCATTTCGTATTCTCAGACCTTTCTATTCTCTCCGAACTACAGAACGCAGCGGCGGCAAGAATCCCAGTGAGAACAGATATTCTTACCCTTGGGACGAAGAAGACCGTAAACCCTCACCGAAATCCAACTCCTCCACTGCTCCTTGGCTCAATAAATGGCCGCCAACGAACCATTCAACCAAATCACCAGACCGGAAAGCCAACAGAAAGGTGGCTGGATTGAACACGGAGGACCAACTTGATCAAGTGGAAACTCGGTATTTTGATAAGGATAGAGGGCAGAATGCGATTGAGAGAATTGTTCTTCGGTTAAGGAATTTAGGATTAGGTTCAGATGAGGACGAGGAGGAAGAGGGGAATGAAGTTGAAGCCCGTGATGCATTGCCAACAGTGATTGGAGAGGAGAGTCTGAGTGATTTGTTAAAGCGAGAGTGGGTTCGACCAGATACCATATTGGCTGAGGATAAGAGCGATGAGATGGTTTTGCCATGGGAGAGAGATGGGGAGAAGGATGAAGCAGAGGAGTTAGATAGGGGACTGAGGAAGAGGAGAGAAAAGGCGCCAACTTTGGCCGAGTTGACACTTGAGGATGAAGAATTGAGGCGATTGAGGAGAATGGGAATGCTTGTCAAAGAGAAGATTAGTGTGCCAAAAGCTGGACTTACACAGGCTGTGCTCGACAAGATTCATGATAAATGGAGGAAGGGGGAAGTCGTGAGGCTCAAGTTTAATGAGGTACTTGCACGGGATATGAAGACGGCTCATGAGATCGTCCAGCGTCGAACAGGAGGGTTAGTTATTTGGAGGTCAGGAAGTGTTATGATGGTGTACCGTGGTAGTAATTATGAAGGACCCTCATCTAGGTGTCAATCCAGTGAAAGAGAAGGCAGTGACCTTTTTTTTCCAGATGTCTCTGCTGGCAATttgtcaaaatcaaaagacAGTGATGCAATCCCATCTCTGGAAAAGAGTGAACCAGTTCTGGGGAATTCAGAACAGCTTAAGAACATGACAGAGGAGGAAGCTGAGTACAACAGCTTACTGGATGGTTTGGGGCCTCGTTTTGTTGAATGGTGGGGTACAGGAGTACTTCCTGTTGATGCTGATTTTCTTCCTCCTAAGGTTCCTGGTTATAAAACACCTTTTAGACTTCTTCCTACTGGAATGCGTTCTCGGCTAACAAATTCAGAGTTGACGAATTTACGGAAAGTTTCCAAATCACTTCCTTGCCATTTTGCCTTAGGGAGAAATAGAAATCATCAAGGTTTGGCATGTGCCATTCTTAAGCTCTGGGAGAAAAGCTCAGTTGCAAAGATTGCTGTCAAACGTGGTATCCAGAATACAAACAACAAGATAATGGCTGAGGAGCTAAAGACATTAACAGGAGGTACCTTGCTcctaagaaataaatattacattgtGATATATCGTGGGAAGGACTTTGTCCCAACAAGTGTGGCTGAGGTCTTAGCTGAAAGACAGGAATTGGCAAATCAGGTACAGGATGTGGAAGAGAAGGTGCGAGGTGGATCTATTGATGCAACTCCGTCAGGGGAAGAAGAAGCATCTGTGCAAGCAGGATCATTAGCTGAGTTCTATGAGGCTCAGGCACGCTGGGGAAGGGATATATCTACTGAAGAACGTGAGAAGATGATTGAAGAAGCTTCCAAAGCTAAGAATGCTAGGCTTGTCAGACGAATTGAACATAAACTAGCTATTGCCCAGGCTAAAAAGCTTAGAGCAGAAAAGCTTTTAGCTAAGATAGAAGCATCCATGGTTCCAGCTGGTCCTGATTATGACCAGGAAACAATCACAGATGAGGAACGTGTGATGTTCCGCAAAGTTGGTTTAAGAATGAAACCATACTTAACACTTGGCATACGTGGGGTTTTCGATGGCGTCATTGAGAATATGCATTTGCATTGGAAGTACCGGGAGCTTGTAAAATtgataacaaaacaaaagacacTTGCTTTTGTTGAAGAGACAGCAAGGTTACTGGAATTTGAGAGTGGGGGAATACTTGTGGCAATAGAAAGATTACCCAAAggattttgtctaatttactATCGTGGAAAGAATTATAGGCGGCCTATTACTTTGAGGCCTAGAAACCTTCTAACAAAGGCAAAGGCATTAAAGCGTTCAATAGCCATGCAACGCCACGAGGCCCTTAGTCAGCATATTGATGAATTAGAGAAAACTACTGAACAGATGAAGAAAGAACTTGGTATGATTGAAGATTGTTGGAGCGGAGAGAACCAGAACCAGATAGATGTTATCTCAGAATTTTCCGAAAGTGAGGATGAAAATTCTGATGGCtatgataatgatgatgatttcAATGACGATGAATATCTTGACTTGGAAGATGACGAAGATTCCGAGTTTTCAAGCTTTGAAAATGAGGTGAAGACAGGTTG 2558 0.4269 MPHAELISSKMAFTTAKLTELPLKTSLPLSSHTSTLNLVFSHPKLSFRILRPFYSLRTTERSGGKNPSENRYSYPWDEEDRKPSPKSNSSTAPWLNKWPPTNHSTKSPDRKANRKVAGLNTEDQLDQVETRYFDKDRGQNAIERIVLRLRNLGLGSDEDEEEEGNEVEARDALPTVIGEESLSDLLKREWVRPDTILAEDKSDEMVLPWERDGEKDEAEELDRGLRKRREKAPTLAELTLEDEELRRLRRMGMLVKEKISVPKAGLTQAVLDKIHDKWRKGEVVRLKFNEVLARDMKTAHEIVQRRTGGLVIWRSGSVMMVYRGSNYEGPSSRCQSSEREGSDLFFPDVSAGNLSKSKDSDAIPSLEKSEPVLGNSEQLKNMTEEEAEYNSLLDGLGPRFVEWWGTGVLPVDADFLPPKVPGYKTPFRLLPTGMRSRLTNSELTNLRKVSKSLPCHFALGRNRNHQGLACAILKLWEKSSVAKIAVKRGIQNTNNKIMAEELKTLTGGTLLLRNKYYIVIYRGKDFVPTSVAEVLAERQELANQVQDVEEKVRGGSIDATPSGEEEASVQAGSLAEFYEAQARWGRDISTEEREKMIEEASKAKNARLVRRIEHKLAIAQAKKLRAEKLLAKIEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLTLGIRGVFDGVIENMHLHWKYRELVKLITKQKTLAFVEETARLLEFESGGILVAIERLPKGFCLIYYRGKNYRRPITLRPRNLLTKAKALKRSIAMQRHEALSQHIDELEKTTEQMKKELGMIEDCWSGENQNQIDVISEFSESEDENSDGYDNDDDFNDDEYLDLEDDEDSEFSSFENEVKTG 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00816 852 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 13 848 - -
Bva04g00816 852 SUPERFAMILY YhbY-like 239 330 IPR035920 -
Bva04g00816 852 Coils Coil 760 787 - -
Bva04g00816 852 Gene3D - 648 748 IPR035920 -
Bva04g00816 852 Gene3D - 437 531 IPR035920 -
Bva04g00816 852 Gene3D - 238 336 IPR035920 -
Bva04g00816 852 MobiDBLite consensus disorder prediction 86 106 - -
Bva04g00816 852 MobiDBLite consensus disorder prediction 809 831 - -
Bva04g00816 852 ProSiteProfiles CRM domain profile. 647 747 IPR001890 GO:0003723
Bva04g00816 852 MobiDBLite consensus disorder prediction 58 120 - -
Bva04g00816 852 Pfam CRS1 / YhbY (CRM) domain 650 724 IPR001890 GO:0003723
Bva04g00816 852 Pfam CRS1 / YhbY (CRM) domain 240 323 IPR001890 GO:0003723
Bva04g00816 852 Pfam CRS1 / YhbY (CRM) domain 438 522 IPR001890 GO:0003723
Bva04g00816 852 ProSiteProfiles CRM domain profile. 436 533 IPR001890 GO:0003723
Bva04g00816 852 ProSiteProfiles CRM domain profile. 238 334 IPR001890 GO:0003723
Bva04g00816 852 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 13 848 IPR045278 GO:0000375|GO:0003729
Bva04g00816 852 Coils Coil 609 636 - -
Bva04g00816 852 SUPERFAMILY YhbY-like 648 746 IPR035920 -
Bva04g00816 852 SUPERFAMILY YhbY-like 438 529 IPR035920 -
Bva04g00816 852 SMART CRS1_YhbY_2 240 323 IPR001890 GO:0003723
Bva04g00816 852 SMART CRS1_YhbY_2 438 522 IPR001890 GO:0003723
Bva04g00816 852 SMART CRS1_YhbY_2 649 736 IPR001890 GO:0003723
Bva04g00816 852 Coils Coil 531 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00816 Bva-Chr4 5385677 5392235 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00816 - - cpap:110823161 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00816 04 5385677 5392235 Bva04g00816 04 5385677 5392235 ECH