Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00814 ATGGCGGGAAAACAATCCTCCGGTGACGGCTTACCCTCTAACCTCACCGGAATGTCCAAGAACCAGCTCTATGACATCATGTCTCAGATGAAGaaccTGATCGAACAGAACCAGCAGCAGGCGAGGCAGATCCTTATCCAGAACCCGTTGCTGACTAAAGCTCTTTTCCagGCACAAATTATGCTTGGAATGGTGCAGCCCCCTCAAGCGGTTCCAAAAATTCAGCCACCGGTCTCTCAGAGCACTCAGCAGTCGGTACAGCCAATGCAGCAGTCAAACATTCAGCCTGCTCCATTATTGCCAGCACAAGGTGGTGTACAGGATCAACCAAGTATATCTCAAACCCAAATTCCTCCAAGGAGACACCTAAACCAACCCCCTGCACCTATGTCATCTAGTGTTGTACCTCCGGTGAGTCATCAATCTCAGCCCATGCCAGCACATTCTTTGCAGACTCCACAACAGCCTAAAGGACACCTTACTGCCCAAATGGCCCCAACGTCTCTTCCACAGTCATCACAACTTCCAAGTGTACCACCACCTTCTCTTCATTCATCTTCACAGCCACTTCaccaaacccaaatgccaACCGCATCTGCTCAGTTACAGCAACCTCTGCAGGCTCCTGGATTTCCGCATATGCCACTGCAACCACCATTGCCACCACAGGTCAGACCATCTTCAGCACCAGCCTTCCATCACCAGTACCCCCCACAAATGGGTACCAATTTGGGTTTTCAACATGGTGGTGCTCCTCATAATCTTCCACAATCTATGTTTCACCCAGGTACTAAAACTCCAGCAAGTGCTGGACCTGCATTTCCACAGGGGCAGACACCACTTCCTAGTCAACCACCAACTCAGTCATCGTACCAAGTTGGGGGTTTGCAAGCCGGAAGTGCAATGCAAGTTGAGAGAGGATCTTCGTGGATGCCAGGTCCCCCCGAAAACGTAACGCAGCATTCTGGTCCTGCGGGACCGCCATCATTAATTCCTGGTCCATTGGGCACTGGCAATCAGGCTCCTAGGGCTGCAGCGTTGTCACCGGAAATGGAGAAAGCACTGCTTCAGCAAGTCATGAGCATTACACCAGAGCAGATAAATCTCCTGCCTCCGGATCAAAGGAATCAAGTGCTGCAGCTGCAACAGATATTGCGCCAATG 1163 0.5013 MAGKQSSGDGLPSNLTGMSKNQLYDIMSQMKNLIEQNQQQARQILIQNPLLTKALFQAQIMLGMVQPPQAVPKIQPPVSQSTQQSVQPMQQSNIQPAPLLPAQGGVQDQPSISQTQIPPRRHLNQPPAPMSSSVVPPVSHQSQPMPAHSLQTPQQPKGHLTAQMAPTSLPQSSQLPSVPPPSLHSSSQPLHQTQMPTASAQLQQPLQAPGFPHMPLQPPLPPQVRPSSAPAFHHQYPPQMGTNLGFQHGGAPHNLPQSMFHPGTKTPASAGPAFPQGQTPLPSQPPTQSSYQVGGLQAGSAMQVERGSSWMPGPPENVTQHSGPAGPPSLIPGPLGTGNQAPRAAALSPEMEKALLQQVMSITPEQINLLPPDQRNQVLQLQQILRQ 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00814 387 MobiDBLite consensus disorder prediction 211 226 - -
Bva04g00814 387 MobiDBLite consensus disorder prediction 271 297 - -
Bva04g00814 387 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 387 - -
Bva04g00814 387 MobiDBLite consensus disorder prediction 75 98 - -
Bva04g00814 387 MobiDBLite consensus disorder prediction 106 121 - -
Bva04g00814 387 Pfam Hinge domain of cleavage stimulation factor subunit 2 5 68 IPR025742 -
Bva04g00814 387 Gene3D - 348 387 IPR038192 -
Bva04g00814 387 Gene3D - 4 71 - -
Bva04g00814 387 Pfam Transcription termination and cleavage factor C-terminal 353 387 IPR026896 GO:0031124
Bva04g00814 387 MobiDBLite consensus disorder prediction 134 206 - -
Bva04g00814 387 MobiDBLite consensus disorder prediction 72 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00814 Bva-Chr4 5374891 5378848 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00814 - - gmx:100801770 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00814 04 5374891 5378848 Bva04g00814 04 5374891 5378848 ECH