Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00802 ATGGAAGCTGATCAATCTCAATCGCCTCAGATAAAAGGTGTTGTCATAATTTCTCTTCCACCACCGGATAACCCCTCCAAAGGCAAAACCATCACCGCTTTTACCGTCTCTGATTCTTCCCCAATCCCATCTCAAGATTTTGTTCAAACCCATGAATCACAACCCCATCTCAACGCCCAAGATAGTAATCTTCCACTTCAATATTACCCACCAAATTCTCAGCTTCAATTTTcgttctggagagtcttcctCAGTAGTCCTGTGAAGCTATTTTGCTTTCTGGGGATtcttctttttggtcttttcctaTATGGTTCTGTTTCTTCAGAAACCCTTCGGGAATTGCGTGGTTCTGAGGATGACAATGGAACCGATTCATTTCTATTCCCTTTGTATCCGAAATTGGGTGTTCATGGTCAGCACGATGTTAAGCTTAGATTGGGCAAGTTTGTTGCTGTACAGAAAAAGAACTTGATAAATCAAAGAACCAGGAATATGGCTTCTACAGTTGCGGCAGTTGATTCATCCTCCGTTTTCCCTGTCAGGGGCAATGTTTATCCAGAAGGGTTGTATTTCACAGAAGTATTTGTTGGAACTCCTCCAAAGCGTTATTTTCTTGATATGGATACTGGAAGTGACTTAACTTGGATTCAGTGTGATGCTCCATGTAGAAGCTGTGCAAAGGGAGCACATATGTTGTACAAGCCAACAACAGACAGTATATTACCACCTGCAGACCCCCTTTGCAAGGAATTTCAGAAGAACCAGAAGAATGGATACTGCGAAAGTTGTCATCAATGTGACTATGAGATTGAATATGCAGATCATAGTTCCTCCTTGGGAGTCCTAATTAGAGATGAGCTTCATCTTCAGACCACAAACGGATCCAAAACCAAGTTGAATTTTGCTTTTGGGTGTGGGTATGATCAAGTAGGCCCACTTTTGAATTCTTTGACAAAAACAGATGGAATCATGGGACTGAGCAGGGCTAAAGTCAGCCTTCCTTTCCAATTGGCAAGCAAAAGGATTATTAAGAATGTCATTGGACATTGCCTCAGTAACTATCGAGTTGGGGGTGGATATATGTTCTTAGGTGATGATTATGTGCCTTATTGGGGTATGACTTGGGTACCCATGGTCAATACTCTAACTACAGATTTATACCAGACCAAGATTCTTGGATTAAACTATGGAAACAGCCCTCTCAGTTTGGGTGGGCGCAGCAAAGTAGGAAACATGGTTTTTGATAGTGGCAGTTCTTATACATATTTTCCGAAAGAGGCTTATTTGGATCTTGTTGCTTCTCTTAAAGAAGTTTCTCAGTTGGGACTCAACCGAGATGATTCAGATACAACTTTACCCATTTGTTGGCAAGCTGATTTCTTGATCAGATCTGTCAAAGATGTAAAGCATATTTTCAACACTTTGACCCTTAGATTTGGAAGCAAATGGTGGATTTTGTCCACATTGTTTCAGATACCTCCAGAAAATTACCTGATCATTAGTAAAAAAGGCAACGTGTGCTTGGCTATCCTTGACGGCACCAGTGTACATGATGGATCCACATTTCTACTTGGAGACATCTCATTGCGAGGATATTTGGTGGTGTATGACAATGCTAACCACAGAATTGGTTGGGAACAATCGCACTGCGTCATGCCAGCCAAAGTGAAAAAGTCTCACAATCTCTTAACGGACACCATGCTGTG 1709 0.4055 MEADQSQSPQIKGVVIISLPPPDNPSKGKTITAFTVSDSSPIPSQDFVQTHESQPHLNAQDSNLPLQYYPPNSQLQFSFWRVFLSSPVKLFCFLGILLFGLFLYGSVSSETLRELRGSEDDNGTDSFLFPLYPKLGVHGQHDVKLRLGKFVAVQKKNLINQRTRNMASTVAAVDSSSVFPVRGNVYPEGLYFTEVFVGTPPKRYFLDMDTGSDLTWIQCDAPCRSCAKGAHMLYKPTTDSILPPADPLCKEFQKNQKNGYCESCHQCDYEIEYADHSSSLGVLIRDELHLQTTNGSKTKLNFAFGCGYDQVGPLLNSLTKTDGIMGLSRAKVSLPFQLASKRIIKNVIGHCLSNYRVGGGYMFLGDDYVPYWGMTWVPMVNTLTTDLYQTKILGLNYGNSPLSLGGRSKVGNMVFDSGSSYTYFPKEAYLDLVASLKEVSQLGLNRDDSDTTLPICWQADFLIRSVKDVKHIFNTLTLRFGSKWWILSTLFQIPPENYLIISKKGNVCLAILDGTSVHDGSTFLLGDISLRGYLVVYDNANHRIGWEQSHCVMPAKVKKSHNLLTDTML 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00802 569 Gene3D Acid Proteases 372 558 IPR021109 -
Bva04g00802 569 Pfam Xylanase inhibitor C-terminal 401 547 IPR032799 -
Bva04g00802 569 Pfam Xylanase inhibitor N-terminal 191 366 IPR032861 -
Bva04g00802 569 Gene3D Acid Proteases 166 366 IPR021109 -
Bva04g00802 569 MobiDBLite consensus disorder prediction 1 25 - -
Bva04g00802 569 PANTHER ASPARTYL PROTEASE APCB1 18 555 - -
Bva04g00802 569 PANTHER ASPARTYL PROTEASES 18 555 IPR001461 GO:0004190|GO:0006508
Bva04g00802 569 SUPERFAMILY Acid proteases 183 552 IPR021109 -
Bva04g00802 569 ProSiteProfiles Peptidase family A1 domain profile. 191 547 IPR033121 -
Bva04g00802 569 PRINTS Pepsin (A1) aspartic protease family signature 523 538 IPR001461 GO:0004190|GO:0006508
Bva04g00802 569 PRINTS Pepsin (A1) aspartic protease family signature 413 424 IPR001461 GO:0004190|GO:0006508
Bva04g00802 569 PRINTS Pepsin (A1) aspartic protease family signature 197 217 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00802 Bva-Chr4 5309334 5312821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g00802 159 565 Miscellaneous Gene Families AT1G77480 43.902 5.68e-103 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00802 - - gmx:100810687 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00802 04 5309334 5312821 Bva04g00802 04 5309334 5312821 ECH