Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00796 atgAACCTCAATGCTTCACTATCATCAATTGCCATCCCCAGTTGCCACCGTTGCCTCCATTTCTCAAAGCCCCTAATTTCACTCCCTTCTTCGCGTTGTTCTATAATTTCTCCGGTTCGCAGTAACAAGGCTTCAGCCATTGCAGCTTCTATGTCTGCAGGACCATCTCCCGCCATGGAAGCAACGACCGCAGAGTCCATGGAACCTAAGAAGAAGGATCCCTGGCTGATTGTTGGCCTTGGCAATCCAGGCAAAGAGTACGCTGGCACTCGCCACAATGTAGGTTTTGAGATGGTTGATGCTATAGCCGAAGCTGAAGAGATACCGATGAGCAGCGTTTCCTTCACAGCCCAGTTTGGAAAAGGTTTTATTGGTGATGTACCAGTTATGCTTGCAAAACCACAAACTTTCATGAATTCAAGTGGTGAGTCAGTCGGGCCccttgtttcatattacaagATTCCATTGAAGCAAGTGCTTGtgATCTTTGATGACTTAGATTTGCCTTTTGCAAAATTGCGGCTGCTTCCAAAGGGTGGACATGGAGGTCAAAATGGGAACTCTGAAGCGGAGAATGTTCATGATCGTGCTGTGCTCAACTTACCATTGTCGTACAGTCTTGTTACCAGGAAACCAAAAGTAAAGTCTtggcttttgttgtttttgggCAGAATGAGGAGTATTATTAATCACTTCAAAGGGAGCGTTGATTTTCCTCGATTAAGAATCGGCATTGGACGGCCTTCTGGGAAAATGGATCCTGTACAATTTGTTCTTAGCCGTTTCACCAAACAGGAAAGGGAAGAGTTGAATTTTACATTTCAACGTGGATTGGAAGCAGTGCGGATTCTTTTGCTCGAGGGCTTTAATAAAAGTGCAACATTTGTGAATACTGCCAAACGTATAGAGCAAACCAGCTA 920 0.4293 MNLNASLSSIAIPSCHRCLHFSKPLISLPSSRCSIISPVRSNKASAIAASMSAGPSPAMEATTAESMEPKKKDPWLIVGLGNPGKEYAGTRHNVGFEMVDAIAEAEEIPMSSVSFTAQFGKGFIGDVPVMLAKPQTFMNSSGESVGPLVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGQNGMRSIINHFKGSVDFPRLRIGIGRPSGKMDPVQFVLSRFTKQEREELNFTFQRGLEAVRILLLEGFNKSATFVNTAKRIEQTS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00796 268 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 87 100 IPR018171 GO:0004045
Bva04g00796 268 Hamap Peptidyl-tRNA hydrolase [pth]. 74 252 IPR001328 GO:0004045
Bva04g00796 268 Pfam Peptidyl-tRNA hydrolase 76 254 IPR001328 GO:0004045
Bva04g00796 268 PANTHER PEPTIDYL-TRNA HYDROLASE 24 264 IPR001328 GO:0004045
Bva04g00796 268 SUPERFAMILY Peptidyl-tRNA hydrolase-like 74 259 IPR036416 GO:0004045
Bva04g00796 268 TIGRFAM pth: aminoacyl-tRNA hydrolase 76 255 IPR001328 GO:0004045
Bva04g00796 268 PANTHER PEPTIDYL-TRNA HYDROLASE CHLOROPLASTIC 24 264 - -
Bva04g00796 268 Gene3D - 60 262 IPR036416 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00796 Bva-Chr4 5195854 5199693 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00796 K01056 - jre:109010743 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00796 04 5195854 5199693 Bva04g00796 04 5195854 5199693 ECH