Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00596 ATGGAAAAAGAAGAGGCAGCGCCATTGCTCGCAAAGTTTGAAGAAACTAATGATGGGATGGCATCCGAGAGTTCATTTTTCCAAGAGCTAAGGAGGGTTGGCTCCATGGCAGCTCCAATGGTGGCTGTGACAGTTTCTCACTACCTTCTGCAAGTTGTGTCTTTGATGATGGTTGGGCATACTGGGAAACTTTCCTTCTCTGGCGTCGCCATTGCTTCCTCTTTTGCCGAAGTTACAGGCTTCAGCGTCCTTATAGGGATGGCTGGTGCTTTGGAAACTTTAGGTGGCCAAGCCTATGGAGCTCAGGAATTTAGAAAGCTGCGAAACTACACTTGCTGTGCACTAATAACTCTGATTTTGGTTTGTTTCCCGATATCTCTCCTCTGGATATTCATGGATAAAATACTTATGCTATGTGGTCAAGACCCCCAAATTTCAAATGCAGCTCACGTTTACTGCACATGCCTGATTCCTGCATTATTCGGCTACGCTGTCCTTCAAACCTTGGTTCGCTACTTCCAGATTCAGAGTATGATCATTCCCATGGTTTTCAGCTCAGTTGCTGCTCTATGTTTGCATGTACCTATCTGTTGGGTTATGGTATTTAAATTGGGACTAGGACATGTTGGAGCAGCATTAGCTATTGGAGTTTCATATTGGTTGAATGTAGTTGGGCTTGGAATTTATATGAAGTATTCTTCAGCATGTGAGAAAACAAGGATTGTGTTCTCTAGAAATGCTTTACTAAATAGTGCTGAGTTCCTACGATTTGCCGTCCCTTCTGGACTGATGTTCTGTTTCGAATGGTGGTCGTTTGAGTTACTTACTTTACTTGCTGGCCTTTTACCTAATCCACACCTTGAAAGCTCAGTTCTATCTATCAGTCTTAACACTACTACATTGCACTACTTCATTTCTTATGGTGTTGGTGCTGCTGTAAGTACCCGGGTTTCAAGTGAATTAGGGGCAGGGAATCCGAAGGCAGCTCGAGCTGCTATTCGTGCTGTTATGACTCTTGGAATTGCAGACGCTGTTTTTTGGAGCAGTGTTTTTTTTTGCTGCCGGAACATCTTGGGATATGCCTATAGCAATGACAAGGAAGTTGTGGATTATGTTGCAGACATGGTCCCTCTTCTTTGTTTGTCTGTCAGCTCAGATAGCTTAATAGGAATACTTTCTGGGATTGCGCGAGGTGGCGGATTTCAGCAAATAGGGACTTACATCAACCTTGGAGCATATTATATTGTGGGAGCTCCCATTGCTGTCTTCTTAGGCTTTGGCCTCCATTTGAATGCCAAGGGACTTTGGATGGGAACACTAACAGGTTCTCTTTTACAAGCAATTATACTTGCTGCTGTAACAGCATTCAAAGATTGGCAGAAAGAGGCAACCAAAGCAAGGGAGAGAATAGTTGACAAGGCTTATAATGGGTTAGTATG 1439 0.4357 MEKEEAAPLLAKFEETNDGMASESSFFQELRRVGSMAAPMVAVTVSHYLLQVVSLMMVGHTGKLSFSGVAIASSFAEVTGFSVLIGMAGALETLGGQAYGAQEFRKLRNYTCCALITLILVCFPISLLWIFMDKILMLCGQDPQISNAAHVYCTCLIPALFGYAVLQTLVRYFQIQSMIIPMVFSSVAALCLHVPICWVMVFKLGLGHVGAALAIGVSYWLNVVGLGIYMKYSSACEKTRIVFSRNALLNSAEFLRFAVPSGLMFCFEWWSFELLTLLAGLLPNPHLESSVLSISLNTTTLHYFISYGVGAAVSTRVSSELGAGNPKAARAAIRAVMTLGIADAVFWSSVFFCCRNILGYAYSNDKEVVDYVADMVPLLCLSVSSDSLIGILSGIARGGGFQQIGTYINLGAYYIVGAPIAVFLGFGLHLNAKGLWMGTLTGSLLQAIILAAVTAFKDWQKEATKARERIVDKAYNGLV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00596 479 PANTHER PROTEIN DETOXIFICATION 7-RELATED 22 468 - -
Bva04g00596 479 CDD MATE_eukaryotic 29 465 IPR045069 GO:0042910|GO:1990961
Bva04g00596 479 Pfam MatE 39 199 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva04g00596 479 Pfam MatE 260 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva04g00596 479 PANTHER MULTIDRUG RESISTANCE PROTEIN 22 468 - -
Bva04g00596 479 TIGRFAM matE: MATE efflux family protein 39 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00596 Bva-Chr4 3927306 3930991 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00596 K03327 - gmx:100798475 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00596 04 3927306 3930991 Bva03g00713 03 4263666 4266710 ECH
Bva04g00596 04 3927306 3930991 Bva04g00596 04 3927306 3930991 ECH