Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g00118 ATGCATTCAAGTTCTTTGCTTCTCGAGGAACCCATTAGGATGGCTTCCGTCCTCGAGCCATCCAAGCCTAGTTACTTTCCAGCAATGACAAAGATTATTGGGACACTGGGTCCAAAGTCGCGGTCTGCTGATACAATCTCGCGTTGCCTTAATGCAGGAATGTCTGTGGCTAGGTTTGATTTCTCATGGGGTGATCCAGAATACCACCAAGAGACATTGGAGAATTTAAAGGCTGCTATCAAGAGTACCAAGAAGCTCTGTGCGGTTATGCTCGATACCGTGGGTCCAGAATTGCAAGTGGTAAATAAAACTGAACACCCAATTTCCCTTCAAGCAGATACCTTGGTTGTCTTGACTCCGgatcaaaacaaagaagctACATCAAATCTCTTACCGGTTAATTTTAATGGGCTGTCAAAGGCTGTGAAGAAGGGTGATACTATTTTTCTCGGTCAGTACCTGTTTACAGGAAGTGAAGCAACTTCGGTGTGGCTGGAGGTCAGTGAGGTTGATGGTGACAGTGTTGCATGTCTTGTAAAAAATTCTGCTACCTTAGCTGGATCATTGTATACTTTACATCTCTCTCAAATTCGTATTGATGCTCCTACACTAACAGATGAAGATAAGGagGTAATAAGCACATGGGGTGTACGGAACAATATAGACTTCCTTTTGTTGTCATACACACGACATGCTGAAGATGTTCGCCATGCCCGAGAATTTCTCTTGAAATTAGGTGACCTCAAGCAAACACAGATTTTTGCAAAGATTGAAAATATAGAGGGATTAACACATTTTGATGAGATATTAAGAGAAGCAGACGGCATTGTTATCGCACGTGGAAATTTGGGGTTAGATCTTCCACCAGAGAAGGTGTTTTTGTTCCAAAAAGCTGCTATTTACAAGTGCAATATGGTCGGCAAGCCAGCCGTTGTAACGCGCGTTGTAGACACTATGACACATAATCTAAGACCTACTCGTGCTGAAGCAACTGATGTTGCCAATATAGTGTTGGATGgAAGTGATGCAATTCTTCTCGGGGCAGAGACCCTCCGGGGACTGTATCCTGTAGAGACCATTTCTACTGTTGGAAAAATCTGTGCTGAGGCGGAGAAAGTTTTTAACCAAGATTTGTATTTCAAGAAGGCTATCAAATATGTGGGAGAGCCAATGACTCATTTGGAATCCATAGCTTCCTCTGCGGTTCGAGCAGCCATCAAGGTTAAGGCCTCTGCTATCATTTGCTTCACTTCATCTGGAAGAGCTGCAAgGTTGATTGCAAAGTACAGGCCAATCATGCCAGTAATATCTGTGGTCATTCCCCAGTTGAAGACAAATCAACTCCGGTGGACTTTTACTGGCGCTTTTGAGGCAAGGCAGTCACTTATTGTGAGAGGCCTTTTCCCTATGCTTGCAGATCCACGGCATCCAGCTGAGGCTAAAAGTGCATCAAATGAATCAATTTTGAAGGTGGCTTTAGACCATGGCAAGGCCTTTGGGGTCATAAAGCCACATGACCGAGTCGTTGTTTGCCAGAAACTTGGTGACTCATCTGTTGTCAAGATTCTTGAGCTTGAAGATTA 1583 0.4327 MHSSSLLLEEPIRMASVLEPSKPSYFPAMTKIIGTLGPKSRSADTISRCLNAGMSVARFDFSWGDPEYHQETLENLKAAIKSTKKLCAVMLDTVGPELQVVNKTEHPISLQADTLVVLTPDQNKEATSNLLPVNFNGLSKAVKKGDTIFLGQYLFTGSEATSVWLEVSEVDGDSVACLVKNSATLAGSLYTLHLSQIRIDAPTLTDEDKEVISTWGVRNNIDFLLLSYTRHAEDVRHAREFLLKLGDLKQTQIFAKIENIEGLTHFDEILREADGIVIARGNLGLDLPPEKVFLFQKAAIYKCNMVGKPAVVTRVVDTMTHNLRPTRAEATDVANIVLDGSDAILLGAETLRGLYPVETISTVGKICAEAEKVFNQDLYFKKAIKYVGEPMTHLESIASSAVRAAIKVKASAIICFTSSGRAARLIAKYRPIMPVISVVIPQLKTNQLRWTFTGAFEARQSLIVRGLFPMLADPRHPAEAKSASNESILKVALDHGKAFGVIKPHDRVVVCQKLGDSSVVKILELED 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g00118 527 SUPERFAMILY PK C-terminal domain-like 358 522 IPR036918 -
Bva04g00118 527 Gene3D - 363 525 IPR036918 -
Bva04g00118 527 Pfam Pyruvate kinase, barrel domain 30 375 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva04g00118 527 SUPERFAMILY PK beta-barrel domain-like 96 186 IPR011037 -
Bva04g00118 527 Gene3D - 97 201 IPR015806 GO:0004743|GO:0006096
Bva04g00118 527 PANTHER PYRUVATE KINASE 3 527 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva04g00118 527 PANTHER PYRUVATE KINASE 3 527 - -
Bva04g00118 527 Pfam Pyruvate kinase, alpha/beta domain 395 515 IPR015795 -
Bva04g00118 527 Gene3D - 30 362 IPR040442 -
Bva04g00118 527 TIGRFAM pyruv_kin: pyruvate kinase 30 515 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva04g00118 527 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 9 375 IPR015813 GO:0003824
Bva04g00118 527 PRINTS Pyruvate kinase family signature 253 279 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva04g00118 527 PRINTS Pyruvate kinase family signature 221 235 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva04g00118 527 PRINTS Pyruvate kinase family signature 85 101 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva04g00118 527 PRINTS Pyruvate kinase family signature 348 364 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva04g00118 527 PRINTS Pyruvate kinase family signature 329 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva04g00118 527 PRINTS Pyruvate kinase family signature 280 304 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g00118 Bva-Chr4 741868 747492 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g00118 K00873 - gmx:100804313 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g00118 04 741868 747492 Bva13g02067 13 16401710 16409157 BWGD