Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02487 ATGGCAGCCATTAAACAAGCTTCATTTCTATTATTACCTCTCTTGCTCATTTCCCTCTTCAAATCCTCCTATGCTGCTGGGATTGCCGTCTATTGGGGCCAAAACACAGGTGAAGGCTCCTTAACAGATGCTTGCAACACTGGCAACTACCAATATGTGAACATTGCTTTCCTCTCAACTTTTGGCAATGGCCAAAACCCACAACTAAACCTTGCCGGCCATTGTGACCCAGCCAGCAATGGCTGCACTGGTTTAAGCAGCGAAATCAAAACTTGCCAAGGCAGCGGCATCAAAGTTCTCCTTTCCCTTGGAGGTGGGGCAGGAGGCTACTCTCTCAACTCAGCCGATGAAGCCAAACAGCTTGCAGATTACCTCTGGAACAACTTCCTGGGAGGACAATCAAGTTCACGTCCATTAGGCGACGCAGTGTTGgatggcattgattttgacaTCGAAGCCGGTGATGGCCAACACTGGGATGAACTTGCCAGGGCACTCAATGACTTCAGCCAACAGAAAAAGGTGTACTTGGCTGCAGCCCCACAATGTGTATTCCCAGATGCTCATTTGAACGGAGCTATCAACACTGGCCTATTTGACTATGTGTGGGTTCAGTTCTATAACAATCCACCATGCCAGTACACTAATGGAAACACTGACAATCTTATTAGTGCATGGAACCAATGGAACTCGGTGAATGCTAAGCAAGTGTTCATGGGCCTACCGGCGGCTCAGGCAGCCGCACCAAGCGGTGGTTTTATACCGGCCGATGTGCTAACTTCTCAGGTTCTTCCTGCCATCAAGGGTTCTTCTAAGTACGGTGGAGTCATGCTGTGGGATAGATTTAATGatgttcaaaataaatacagcGATGCTATTAAGGATGCAATCTA 893 0.4625 MAAIKQASFLLLPLLLISLFKSSYAAGIAVYWGQNTGEGSLTDACNTGNYQYVNIAFLSTFGNGQNPQLNLAGHCDPASNGCTGLSSEIKTCQGSGIKVLLSLGGGAGGYSLNSADEAKQLADYLWNNFLGGQSSSRPLGDAVLDGIDFDIEAGDGQHWDELARALNDFSQQKKVYLAAAPQCVFPDAHLNGAINTGLFDYVWVQFYNNPPCQYTNGNTDNLISAWNQWNSVNAKQVFMGLPAAQAAAPSGGFIPADVLTSQVLPAIKGSSKYGGVMLWDRFNDVQNKYSDAIKDAI 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02487 297 Pfam Glycosyl hydrolases family 18 28 284 IPR001223 GO:0005975
Bva03g02487 297 PANTHER ENDOCHITINASE 14 296 - -
Bva03g02487 297 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 26 297 IPR001223 GO:0005975
Bva03g02487 297 CDD GH18_hevamine_XipI_class_III 26 295 IPR045321 -
Bva03g02487 297 PANTHER ACIDIC ENDOCHITINASE 14 296 - -
Bva03g02487 297 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 144 152 IPR001579 GO:0004553|GO:0005975
Bva03g02487 297 Gene3D Glycosidases 26 297 - -
Bva03g02487 297 SUPERFAMILY (Trans)glycosidases 27 293 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02487 Bva-Chr3 21000902 21001954 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02487 3 293 Glycoside Hydrolase AT5G24090 60.339 4.24e-129 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02487 K01183 - gmx:100783329 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02487 03 21000902 21001954 Bva03g02487 03 21000902 21001954 ECH