Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02486 ATGGCTCAAGTTGTGGCCACTAGATCGATTCAGAGCTCGCTTTTCCGCCCGGCCTCTGGATCTGTACAAGACAGAGCTGAAAAGTTAAAGCCTACAACTTTTGCTTCTAAAGTTTTCGCTGATGAAGGGAAGAAGACCTCAAAGCTCGTTTTCAAAAGCTCCCAAATCAGTGCAAGGAAATCTGCACCCACTGAAGTCATTCCCGTTTCACCTGAGGATGATTCAAAGATTGAGGAGCAGTTGCAGCATTTGCGTGGGATTCAACAACTCGGTGACACATCAGTTGGAGTGTGGTCGAAACCTACATTTAGACGCAAGACAAAGATAGTTTGTACTATTGGTCCTTCTACCAACACCAAGGAAATGATTTGGAAGCTGGCTGAAGCCGGGATGAATGTTGCTCGCCTCAATATGTCTCATGGAGACCACGCTTCTCATCAGAAAGTTATTGATttagtaaaagaatataatgcACAATCCAAAGACAATGTAATTGCAATTATGCTTGACACAAAGGGTCCTGAGGTTAGGAGTGGGGATTTGCCACAACCAATCACATTACATAGTGGCCAGGAATTTACTTTTACTATTAGGAGAGGTGTTGGAACTGCAGATTGTGTTAGTGTGAACTATGATGATTTTGTCAATGACGTGGAAGTGGGGGACATACTTCTTGTTGATGGGGGTATGATGTCTTTCTTGGTTAAGTCTAAGACAGAGGACTCTGTGAAGTGTGAAGTTGTTGACGGAGGGGAGCTGAAGTCAAGGAGACATTTGAATGTTCGAGGAAAAAGTGCTACACTACCATCCATCACTGAAAAGGATTGGGACGACATCAAATTTGGAGTGGATAACAAAGTTGACTTTTATGCAGTTTCCTTTGTTAAGGATGCTCAAGTAGTTCATGAGCTGaagaattatttgaaaaGCTGTGGTGCTGATATACATGTCATCGTAAAAATTGAAAGTGCAGACTCCATACCAAACTTGCATTCAATTATTACTGCATCTGATGGAGCCATGGTTGCAAGAGGAGATCTTGGTGCAGAGCTCCCTATTGAGGAGGTTCCACTTTTGCAGGAAGAGATCATCTCAATATGCCGTAGCATGGGGAAAGCTGTCATAGTAGCAACAAATATGTTGGAAAGCATGATTGTTCACCCAACACCAACCAGAGCAGAGGTATCAGACATTGCGATCGCTGTTCGAGAAGGTGCTGATGCAATCATGCTGTCTGGAGAAACTGCTCATGGGAAGTTCCCACTAAAAGCTGTGAAAGTAATGCACACAGTAGCACTACGTACAGAAGCTACCATACCAGGTGGTCAAATGCCACCTAATCTTGGTCAAGTATTCAAGAACCACATGAGTGAGATGTTTGCTTACCATGCAACAATGATGTCAAACACCCTTGGAACCTCGACTGTTGTCTTCACTAGAACTGGTTTCATGGCTATCCTTCTGAGCCACTATCGACCTTCTGGCACTATATTCGCTTTTACAGATGAGAAGAGGATACAACAGAGGCTGGCTCTGTACCAAGGAGTGTGTCCTATTTACATGGAATTTTCTGATGATTCTGAAGAGACATTCAAACGAGCGTTGGATTTCTTGCAGAACCAAGGAATGgtgaagaaaggagaagaagtaGCCCTTGTACAGAGTGGCAGACAACCCATTTGGAGGTTCCAGTCCACTCATAATATCCAGGTCCGGAAAGTGTG 1724 0.4269 MAQVVATRSIQSSLFRPASGSVQDRAEKLKPTTFASKVFADEGKKTSKLVFKSSQISARKSAPTEVIPVSPEDDSKIEEQLQHLRGIQQLGDTSVGVWSKPTFRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPITLHSGQEFTFTIRRGVGTADCVSVNYDDFVNDVEVGDILLVDGGMMSFLVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNKVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIISICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADAIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGQMPPNLGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRTGFMAILLSHYRPSGTIFAFTDEKRIQQRLALYQGVCPIYMEFSDDSEETFKRALDFLQNQGMVKKGEEVALVQSGRQPIWRFQSTHNIQVRKV 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02486 574 Gene3D - 447 574 IPR036918 -
Bva03g02486 574 SUPERFAMILY PK beta-barrel domain-like 174 265 IPR011037 -
Bva03g02486 574 Pfam Pyruvate kinase, barrel domain 105 440 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva03g02486 574 Gene3D - 175 268 IPR015806 GO:0004743|GO:0006096
Bva03g02486 574 TIGRFAM pyruv_kin: pyruvate kinase 105 573 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva03g02486 574 Pfam Pyruvate kinase, alpha/beta domain 462 554 IPR015795 -
Bva03g02486 574 ProSitePatterns Pyruvate kinase active site signature. 315 327 IPR018209 GO:0004743|GO:0006096
Bva03g02486 574 Gene3D - 107 432 IPR040442 -
Bva03g02486 574 PANTHER PYRUVATE KINASE 39 574 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva03g02486 574 PRINTS Pyruvate kinase family signature 287 301 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva03g02486 574 PRINTS Pyruvate kinase family signature 317 343 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva03g02486 574 PRINTS Pyruvate kinase family signature 344 368 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva03g02486 574 PRINTS Pyruvate kinase family signature 394 412 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva03g02486 574 PRINTS Pyruvate kinase family signature 369 393 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva03g02486 574 PRINTS Pyruvate kinase family signature 163 179 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva03g02486 574 PRINTS Pyruvate kinase family signature 413 429 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva03g02486 574 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 96 439 IPR015813 GO:0003824
Bva03g02486 574 SUPERFAMILY PK C-terminal domain-like 423 574 IPR036918 -
Bva03g02486 574 PANTHER PLASTIDIAL PYRUVATE KINASE 2 39 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02486 Bva-Chr3 20994085 20999850 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02486 K00873 - gmx:100818193 1028.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02486 03 20994085 20999850 Bva03g02486 03 20994085 20999850 ECH