Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva03g02480 ATGGAGCAGAAGCACGTTCTGTTGTCAGCATTGAGTGTTGGGGTTGGGTTGGGAGTGGGGCTCGGATTGAGTTCAGGGCAGACCGTGCAGAAATGGATTGGTGGGAATCGCGAACCTGGTGAGGTTACTGGGGAGCAGATTGAGCTGGAGCTCATGAGGCAAGTCGTTGATGGAAGGATAGCAAATGAAAGAACCCGAGTATCGTTGACAAGTGCTGCATATGTTCATTTAAAACATATGCACTTCTCCAAACACACCCGAAACCTTTCTCCTGCAAGCAGGACAATTTTGCTGTCTGGACCTACAGaaCTTTACCAGCAAAGGCTTGCCAGAGCTTTAGCACATCACTTCGAGTCAAAGTTGCTGTTGCTAGATGTTACTGACTTTTCTTTGAAGTTGCAGAGCAAATATGGTTGTGCAAGAAAAGAACCTTCTTTTAAAAGGTCTTTATCCGAGGTGACTTTGGAGAAAATGTCCGGTTTGTTTAATTCCTTTTCAATCCTCCCTCCAAGTGGCGAAACTAGAGGCACCTTGCGTCGACAAACCAATGGTGTTGAGAGTAAGCCAAgGAGTATTGGAACCTTCACTAAACTTAGTAGGAATGCCTCTGCTGCTTCTGATATTAGTAGCATTTCTTCACAGAGTAGTCTTACAAATCCAGcTGCTTTGAAGCATACCAAAAGTTTGTGCTTTGATGAAAAGCTCTTTATGTTATCGCTTTGCAAGGTCTTGGTTTGTATCTCAGAAACTGGTTccatcattttatatatcagGAATGTTGAGAAGCTTTTTCTCCAATCACAAAGGTTATACAATTTGTTCCAAAAGATGCTTGGGAAACTTGCAGGGTCAATTTTGATACTTGGTTCACGGATATTAGATCCAAAAGATGATTGTGCCGAAGTTGATGAAAGGCTCACTGTGTTATTCCCTTATAACATTGAGATCAAACCGCCTGAAGATGATGAGATTAATCTTAGCGACTGGAAAGTCCGACTGGATGAGGACATGAAAGCAATTCAGTTTCAAGATAACAGAAACCACATTGCTGAAGTACTAGCAGCAAATGACATTGAATGTGATGATTTGAATTCAATCTGCCATTCAGACACAATGCTACTCAGTAACTATATTGAAGAGATTGTGGTATCTGCAATATCATACCATTTGATGCATACTAAGAATCCGGAATACCGAAATGGAAAGCTAGTTATATCGTCCAAGAGTTTGTCCCATGGATTGAGTCTGTTTCAGGAGGGACAAAGTTGTGATAAAGATACTCTGAAGCTGGAGACTAATGAATCTAACAAGGACCCTGGTGGAGAAGAGAGTACTGGTGCAAAGAAAGATGTAAAGTCTGACACCCAAGCACCTGATAGCAAAAATGAGATACCTGTCACAAAGAAAGATGGCGACATTTCCATTCCTATAAAAGATGTTCCTCCTGACAATGAGTTTGAGAGGCGCATAAGACCAGAGGTTATCCCTGCAAATGAGATTGGGGTTACATTTGCGGATATTGGTGCGATGGATGAAATAAAGGAATCACTTCAAGAGCTGGTCATGCTTCCTCTGAGAAGACCAGACCTCTTCAAAGGTGGCCTTCTGAAGCCTTGCAGAGGCATATTGCTTTTTGGACCTCCTGGTACAGGCAAAACAATGCTTGCCAAGGCAATTGCAAATGAAGCTGGAGCATGTTTCATTAACGTTTCAATGTCAACCATCACTTCAAAATGGTTTggagaagatgaaaagaatGTCCGAGCTCTGTTCACACTTGCTGCAAAGGTTGCCCCAACTATAATCTTTGTTGATGAGGTTGATAGCATGCTTGGGCAGAGGACTAGAGTTGGAGAACATGAGGCCATGCGGAAGATTAAAAATGAGTTCATGACCCATTGGGATGGGCTGTTGACAAAAGCTGGTGAGCAAATTCTAGTTCTTGCTGCGACTAACAGGCCATTTGACCTTGATGAAGCAATTATTAGACGGTTTGAGCGCAGAATCATGGTTGGTCTTCCGTCCGTTGAGAACAGGGAAGTTATCCTCAAAACTCTCCTATCTAAGGAAAAGGTTGATGAAAGTATGGACTTCAAAGAGCTTGCAGTCATGACAGAAGGATATACTGGAAGTGATCTTAAgAATTTGTGTACAACCGCAGCTTATCGACCTCTTAGGGAGTTAATACAGCAGGAGAGATTGAAGGAGATGgaaaagaagaagaaagaagcagAAGGAAAAAGCTCAGAAGATGCTTCTGATACTAAAGATAAAGAGGAAGAAGTAATTACCCTGAGGCCTTTAAACACGGAAGACATGAGACAAGCTAAGAGTCAGATTGCTGCAAGCTTTGCCTCAGAAGGATCAATAATGACTGAGCTGAAACAGTGGAATGATTTGTATGGAGAAGGGGGTTCAAGGAAGAAACAACAGCTTACTTATTTTCTGTA 2450 0.4122 MEQKHVLLSALSVGVGLGVGLGLSSGQTVQKWIGGNREPGEVTGEQIELELMRQVVDGRIANERTRVSLTSAAYVHLKHMHFSKHTRNLSPASRTILLSGPTELYQQRLARALAHHFESKLLLLDVTDFSLKLQSKYGCARKEPSFKRSLSEVTLEKMSGLFNSFSILPPSGETRGTLRRQTNGVESKPRSIGTFTKLSRNASAASDISSISSQSSLTNPAALKHTKSLCFDEKLFMLSLCKVLVCISETGSIILYIRNVEKLFLQSQRLYNLFQKMLGKLAGSILILGSRILDPKDDCAEVDERLTVLFPYNIEIKPPEDDEINLSDWKVRLDEDMKAIQFQDNRNHIAEVLAANDIECDDLNSICHSDTMLLSNYIEEIVVSAISYHLMHTKNPEYRNGKLVISSKSLSHGLSLFQEGQSCDKDTLKLETNESNKDPGGEESTGAKKDVKSDTQAPDSKNEIPVTKKDGDISIPIKDVPPDNEFERRIRPEVIPANEIGVTFADIGAMDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGACFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKAGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREVILKTLLSKEKVDESMDFKELAVMTEGYTGSDLKNLCTTAAYRPLRELIQQERLKEMEKKKKEAEGKSSEDASDTKDKEEEVITLRPLNTEDMRQAKSQIAASFASEGSIMTELKQWNDLYGEGGSRKKQQLTYFL 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva03g02480 816 MobiDBLite consensus disorder prediction 736 767 - -
Bva03g02480 816 Pfam ATPase family associated with various cellular activities (AAA) 542 672 IPR003959 GO:0005524|GO:0016887
Bva03g02480 816 Gene3D - 674 745 - -
Bva03g02480 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 739 IPR027417 -
Bva03g02480 816 MobiDBLite consensus disorder prediction 736 770 - -
Bva03g02480 816 Pfam AAA+ lid domain 697 738 IPR041569 -
Bva03g02480 816 Gene3D - 501 673 IPR027417 -
Bva03g02480 816 MobiDBLite consensus disorder prediction 425 481 - -
Bva03g02480 816 SMART AAA_5 538 675 IPR003593 -
Bva03g02480 816 ProSitePatterns AAA-protein family signature. 645 664 IPR003960 GO:0005524|GO:0016887
Bva03g02480 816 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 816 - -
Bva03g02480 816 CDD AAA 508 673 - -
Bva03g02480 816 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 816 - -
Bva03g02480 816 Coils Coil 725 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva03g02480 Bva-Chr3 20944475 20951600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva03g02480 502 734 Calmodulin-binding Proteins AT3G56690 40.254 3.52e-45 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva03g02480 - - jre:109010848 1213.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g02480 03 20944475 20951600 Bva03g02480 03 20944475 20951600 ECH